Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01045 and RBAM_006460

See DNA alignment / Visit BSNT_01045 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:43
# Commandline: needle
#    -asequence pep-align/BSNT_01045___ydiL.1.9828.seq
#    -bsequence pep-align/RBAM_006460___ydiL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01045___ydiL-RBAM_006460___ydiL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01045___ydiL-RBAM_006460___ydiL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01045___ydiL
# 2: RBAM_006460___ydiL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity:     185/244 (75.8%)
# Similarity:   214/244 (87.7%)
# Gaps:           0/244 ( 0.0%)
# Score: 970.0
# 
#
#=======================================

BSNT_01045___      1 MRKQYWFIILTYIIMQFSALIAIPLLFKFGYAGGQPTDENMLHAQGLWSV     50
                     ||||||:|||||:|||.||||.|||::|||||||.||:.|:..|||::||
RBAM_006460__      1 MRKQYWYIILTYVIMQLSALIGIPLMYKFGYAGGHPTNANLTMAQGIYSV     50

BSNT_01045___     51 ISFIACLVVVLLILRTVPKETLRNGQKDSIGLSILWAIAGFFIALFSQGI    100
                     :||..||::|||||||.||:|||||:|.|.|:|:|||:||.::|||||||
RBAM_006460__     51 VSFFICLIIVLLILRTAPKQTLRNGKKASAGMSVLWAVAGIWLALFSQGI    100

BSNT_01045___    101 AGSIEYYVFGIGRESENTQAILDVIQAVPLMIIVSSIVGPILEEIIFRKI    150
                     ||.||.|||.:|..||||:|||.:|:|:||||||||||||||||||||||
RBAM_006460__    101 AGMIEQYVFHVGSGSENTKAILSIIKAMPLMIIVSSIVGPILEEIIFRKI    150

BSNT_01045___    151 IFGALYEKTNFFFAGLISSVIFGIVHADLKHLLLYTAMGFTFAFLYARTK    200
                     |||.||||||||.|||||||||||||.||.||||||||||||||||.:||
RBAM_006460__    151 IFGVLYEKTNFFIAGLISSVIFGIVHQDLTHLLLYTAMGFTFAFLYVQTK    200

BSNT_01045___    201 RIWVPIFAHLMMNTFVVIMQLEPVRNYLEQQSTQMQLIIGGLFL    244
                     ||.||||||:||||.||:|||.|.:.|:||.|.||||||||||:
RBAM_006460__    201 RIIVPIFAHVMMNTIVVVMQLGPAQKYIEQHSEQMQLIIGGLFV    244


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