Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01043 and RBAM_006440

See DNA alignment / Visit BSNT_01043 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:43
# Commandline: needle
#    -asequence pep-align/BSNT_01043___tatCY.1.9828.seq
#    -bsequence pep-align/RBAM_006440___tatCy.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01043___tatCY-RBAM_006440___tatCy.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01043___tatCY-RBAM_006440___tatCy.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01043___tatCY
# 2: RBAM_006440___tatCy
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 251
# Identity:     207/251 (82.5%)
# Similarity:   236/251 (94.0%)
# Gaps:           2/251 ( 0.8%)
# Score: 1094.0
# 
#
#=======================================

BSNT_01043___      1 MKVNQMSLLEHIAELRKRLLIVALAFVVFFIAGFFLAKPIIVYLQETDEA     50
                     |:||||:|:|||||||||||||||:|.||||||||||||||||||:.||.
RBAM_006440__      1 MRVNQMTLVEHIAELRKRLLIVALSFTVFFIAGFFLAKPIIVYLQKADEV     50

BSNT_01043___     51 KQLTLNAFNLTDPLYVFMQFAFIIGIVLTSPVILYQLWAFVSPGLYEKER    100
                     |:||||||||||||::|:||||||||:||||:||||:|||||||||||||
RBAM_006440__     51 KELTLNAFNLTDPLFIFLQFAFIIGIILTSPIILYQIWAFVSPGLYEKER    100

BSNT_01043___    101 KVTLSYIPISILLFLAGLSFSYYILFPFVVDFMKRISQDLNVNQVIGINE    150
                     |||||||||||:||:.|:|||||||||.|||||||:|.||:|||||||.|
RBAM_006440__    101 KVTLSYIPISIVLFVGGVSFSYYILFPLVVDFMKRVSNDLDVNQVIGITE    150

BSNT_01043___    151 YFHFLLQLTIPFGLLFQMPVILMFLTRLGIVTPMFLAKIRKYAYFTLLVI    200
                     ||||||||||||||||||||::|||||||::|||||:||||||||.||||
RBAM_006440__    151 YFHFLLQLTIPFGLLFQMPVLIMFLTRLGVITPMFLSKIRKYAYFVLLVI    200

BSNT_01043___    201 AALITPPELLSHMMVTVPLLILYEISILISKAAYRKAQKSSAADQDVSSV    250
                     ||:|.|||||||:|:|:||.||||:|||||||||||.|.||.:|||||: 
RBAM_006440__    201 AAMIAPPELLSHLMITIPLCILYEVSILISKAAYRKRQTSSESDQDVSA-    249

BSNT_01043___    251 Q    251
                      
RBAM_006440__    249 -    249


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