Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01043 and RBAM_006440
See
Amino acid alignment /
Visit
BSNT_01043 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:43
# Commandline: needle
# -asequence dna-align/BSNT_01043___tatCY.1.9828.seq
# -bsequence dna-align/RBAM_006440___tatCy.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01043___tatCY-RBAM_006440___tatCy.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01043___tatCY-RBAM_006440___tatCy.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01043___tatCY
# 2: RBAM_006440___tatCy
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 759
# Identity: 602/759 (79.3%)
# Similarity: 602/759 (79.3%)
# Gaps: 12/759 ( 1.6%)
# Score: 2395.5
#
#
#=======================================
BSNT_01043___ 1 ATGAAAGTGAATCAAATGTCGCTGCTGGAGCATATTGCTGAGCTTCGAAA 50
||||.|||||||||||||.||||..|||||||||||||.||.|||||.||
RBAM_006440__ 1 ATGAGAGTGAATCAAATGACGCTTGTGGAGCATATTGCCGAACTTCGGAA 50
BSNT_01043___ 51 ACGGTTGCTGATTGTAGCGCTGGCGTTTGTCGTTTTCTTTATTGCTGGAT 100
|||.|||||||||||.|||.|..|.|||...||||||||||||||.||.|
RBAM_006440__ 51 ACGATTGCTGATTGTGGCGTTATCCTTTACGGTTTTCTTTATTGCCGGCT 100
BSNT_01043___ 101 TTTTTTTAGCAAAGCCGATTATTGTGTATCTGCAAGAAACAGATGAAGCG 150
|||||.|.|||||.||.||.|||||||||||.|||.||.|.|||||||..
RBAM_006440__ 101 TTTTTCTGGCAAAACCTATCATTGTGTATCTTCAAAAAGCCGATGAAGTA 150
BSNT_01043___ 151 AAGCAGCTTACGCTTAACGCGTTTAACCTGACAGACCCGCTTTATGTGTT 200
||..||||.||.|||||.||.|||||||||||.||.|||||.|.|.|.||
RBAM_006440__ 151 AAAGAGCTCACCCTTAATGCTTTTAACCTGACGGATCCGCTGTTTATCTT 200
BSNT_01043___ 201 TATGCAGTTTGCGTTTATCATCGGCATAGTCCTGACCTCGCCAGTTATTC 250
|.|||||||.|||||||||||||||||..|..||||.|||||..||||||
RBAM_006440__ 201 TTTGCAGTTCGCGTTTATCATCGGCATCATTTTGACTTCGCCGATTATTC 250
BSNT_01043___ 251 TTTATCAGCTTTGGGCTTTTGTGAGCCCGGGTCTCTATGAGAAAGAGCGC 300
|.||||||.|||||||.|||||.|||||||||||.||||||||.||||||
RBAM_006440__ 251 TCTATCAGATTTGGGCGTTTGTCAGCCCGGGTCTGTATGAGAAGGAGCGC 300
BSNT_01043___ 301 AAAGTAACGCTCAGCTACATTCCGATCTCTATTTTGCTGTTTTTAGCGGG 350
||||||||.||||||||.||||||||.||.||..||||||||.|.|..||
RBAM_006440__ 301 AAAGTAACACTCAGCTATATTCCGATTTCGATCGTGCTGTTTGTCGGCGG 350
BSNT_01043___ 351 CTTATCTTTTTCATATTATATTTTATTTCCTTTTGTTGTTGATTTTATGA 400
..|.||.|||||.|||||||||||||||||..|.||.|||||||||||||
RBAM_006440__ 351 TGTGTCGTTTTCTTATTATATTTTATTTCCGCTGGTCGTTGATTTTATGA 400
BSNT_01043___ 401 AGCGGATCTCTCAGGACTTGAATGTCAATCAGGTGATCGGAATTAATGAA 450
|||||.|.||..|.|||.|..|||||||.|||||||||||.||||..|||
RBAM_006440__ 401 AGCGGGTTTCGAATGACCTCGATGTCAACCAGGTGATCGGGATTACCGAA 450
BSNT_01043___ 451 TATTTTCATTTTCTTCTGCAGCTGACGATTCCGTTTGGACTGCTGTTCCA 500
||.|||||||||||.|||||||||||||||||||||||.||||||||.||
RBAM_006440__ 451 TACTTTCATTTTCTGCTGCAGCTGACGATTCCGTTTGGGCTGCTGTTTCA 500
BSNT_01043___ 501 AATGCCGGTCATCCTTATGTTTTTGACCAGGCTCGGAATTGTG---ACAC 547
.||||||||..|..|.||||||||.||.||.||||| |||| ||.|
RBAM_006440__ 501 GATGCCGGTGCTGATCATGTTTTTAACGAGACTCGG---TGTGATCACGC 547
BSNT_01043___ 548 CGATGTTCTTGGCGAAAATCAGAAAGTATGCGTATTTTACGCTGCTGGTG 597
|||||||.||..|.||.|||||.|||||.|||||||||..||||||.|||
RBAM_006440__ 548 CGATGTTTTTATCAAAGATCAGGAAGTACGCGTATTTTGTGCTGCTTGTG 597
BSNT_01043___ 598 ATCGCAGCCCTGATTACACCGCCTGAGCTTCTGTCCCATATGATGGTCAC 647
|||||.||..|||||.|.|||||||||||.|||||.||..|||||.|.||
RBAM_006440__ 598 ATCGCCGCGATGATTGCGCCGCCTGAGCTGCTGTCTCACTTGATGATTAC 647
BSNT_01043___ 648 AGTCCCGCTTTTGATTTTATATGAAATCAGTATTCTGATATCGAAGGCCG 697
..|.|||||||..||||||||.||..|||||||.|||||.||.||.||.|
RBAM_006440__ 648 CATTCCGCTTTGCATTTTATACGAGGTCAGTATCCTGATTTCAAAAGCGG 697
BSNT_01043___ 698 CCTATCGGAAAGCGCAGAAAAGCAGTGCAGCCGATCAGGACGTGTCTTCT 747
|.|||||||||..|||||..|||||||.|.|||||||||||||.||..|
RBAM_006440__ 698 CGTATCGGAAAAGGCAGACCAGCAGTGAATCCGATCAGGACGTATCAGC- 746
BSNT_01043___ 748 GTGCAATAA 756
||||
RBAM_006440__ 747 -----ATAA 750
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.