Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01037 and RBAM_006400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:42
# Commandline: needle
# -asequence pep-align/BSNT_01037___ydiF.1.9828.seq
# -bsequence pep-align/RBAM_006400___ydiF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01037___ydiF-RBAM_006400___ydiF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01037___ydiF-RBAM_006400___ydiF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01037___ydiF
# 2: RBAM_006400___ydiF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 643
# Identity: 549/643 (85.4%)
# Similarity: 602/643 (93.6%)
# Gaps: 2/643 ( 0.3%)
# Score: 2850.0
#
#
#=======================================
BSNT_01037___ 1 MMILQINQLSKSFGADTILNNIKLEVRNRDRIAIVGRNGAGKSTLLKIIA 50
||||||||||||||||.||||||||||:||||||||||||||||||||||
RBAM_006400__ 1 MMILQINQLSKSFGADPILNNIKLEVRSRDRIAIVGRNGAGKSTLLKIIA 50
BSNT_01037___ 51 GQLSYEKGEIIKPKDITMGYLAQHTGLDSKLTIKEELLTVFDHLKAMEKE 100
|.|||||||:||||::|||||||||||:|:||||||||:|||:|||||||
RBAM_006400__ 51 GHLSYEKGELIKPKELTMGYLAQHTGLESQLTIKEELLSVFDYLKAMEKE 100
BSNT_01037___ 101 MRAMEEKMAAAAPGELESIMKTYDRLQQEFKDKGGYQYEADVRSVLHGLG 150
||::|||||.|||.|||::|||||||||:|||||||||||||||:|||||
RBAM_006400__ 101 MRSIEEKMATAAPAELETLMKTYDRLQQDFKDKGGYQYEADVRSILHGLG 150
BSNT_01037___ 151 FSHFDDSTQVQSLSGGQKTRLALGKLLLTQPDLLILDEPTNHLDIDTLTW 200
|..||||.:|||||||||||||||||||||||||||||||||||||||||
RBAM_006400__ 151 FGKFDDSVKVQSLSGGQKTRLALGKLLLTQPDLLILDEPTNHLDIDTLTW 200
BSNT_01037___ 201 LEHFLQGYSGAILIVSHDRYFLDKVVNQVYEVSRAESKKYHGNYSAYLDQ 250
|||:||||||||||||||||||||||:|||||||.|||||.|||||||:|
RBAM_006400__ 201 LEHYLQGYSGAILIVSHDRYFLDKVVSQVYEVSRTESKKYLGNYSAYLEQ 250
BSNT_01037___ 251 KAAQYEKDLKMYEKQQDEIAKLQDFVDRNLARASTTKRAQSRRKQLERME 300
||.|||||||:||||||||||||||||||||||||||||||||||||||:
RBAM_006400__ 251 KAEQYEKDLKLYEKQQDEIAKLQDFVDRNLARASTTKRAQSRRKQLERMD 300
BSNT_01037___ 301 VMSKPLGDEKSANFHFDITKQSGNEVLRVHDLTISYENQPPLLTEVSFML 350
||:|||||||||.|.|||||||||:||||.|::|||:.|||||..::|.:
RBAM_006400__ 301 VMAKPLGDEKSAAFRFDITKQSGNDVLRVQDVSISYDGQPPLLKNLTFGI 350
BSNT_01037___ 351 TRGESAALVGPNGIGKSTLLKTLIDTLKPDQGTISYGSNVSVGYYDQEQA 400
||||||||||||||||||||||:::|:.|:.|:|:|||||::||||||||
RBAM_006400__ 351 TRGESAALVGPNGIGKSTLLKTIMNTISPESGSITYGSNVTIGYYDQEQA 400
BSNT_01037___ 401 ELTSSKRVLDELWDEYPGLPEKEIRTCLGNFLFSGDDVLKPVHSLSGGEK 450
|||||||||||||||||.:|||||||||||||||||||||||.|||||||
RBAM_006400__ 401 ELTSSKRVLDELWDEYPDMPEKEIRTCLGNFLFSGDDVLKPVRSLSGGEK 450
BSNT_01037___ 451 ARLALAKLMLQKANFLILDEPTNHLDLDSKEVLENALIDYPGTLLFVSHD 500
||:|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_006400__ 451 ARVALAKLMLQKANFLILDEPTNHLDLDSKEVLENALIDYPGTLLFVSHD 500
BSNT_01037___ 501 RYFINRIATRVLELSSSHIEEYLGDYDYYTEKKTEQLELEKINQQEETEK 550
|||||||||||||||..|.||||||||||||||.:|||||::.:||:.:.
RBAM_006400__ 501 RYFINRIATRVLELSPDHAEEYLGDYDYYTEKKAQQLELEEMKRQEKEQA 550
BSNT_01037___ 551 TPA-TVKSDSKRSYEEEKEWKKKERQRLRRIEEIETTVQTIEENISRNDE 599
.|| .||.|:||:|||||||||||||||||||||||.|.:.||.||.|:|
RBAM_006400__ 551 QPAGKVKQDTKRTYEEEKEWKKKERQRLRRIEEIETAVSSAEEKISANEE 600
BSNT_01037___ 600 LLCDPEVYQDHEKVQAIHADNEKLNQELESLLSEWEELSTEED 642
|||||:|||||||||.|||:||.||||||:||:||||||.||
RBAM_006400__ 601 LLCDPDVYQDHEKVQTIHAENEALNQELENLLAEWEELSLEE- 642
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