Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01035 and RBAM_006380

See DNA alignment / Visit BSNT_01035 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:42
# Commandline: needle
#    -asequence pep-align/BSNT_01035___ydiD.1.9828.seq
#    -bsequence pep-align/RBAM_006380___ydiD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01035___ydiD-RBAM_006380___ydiD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01035___ydiD-RBAM_006380___ydiD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01035___ydiD
# 2: RBAM_006380___ydiD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 151
# Identity:     129/151 (85.4%)
# Similarity:   141/151 (93.4%)
# Gaps:           0/151 ( 0.0%)
# Score: 708.0
# 
#
#=======================================

BSNT_01035___      1 MKTKAAVRNMRLEDIDHVYEIEASSFTSPWTKDSFYHELLENPYAHYLVI     50
                     ||||.|:|:||.||||.:||||.:||||||||||||||||||||||||||
RBAM_006380__      1 MKTKTAIRSMRPEDIDQIYEIETASFTSPWTKDSFYHELLENPYAHYLVI     50

BSNT_01035___     51 EKDGYLAGYCGIWIVMDDAQITNIAIKPEYRGQSLGETLFRSAVELCKEK    100
                     ||||.|||||||||::|||||||||||||||||||||.|||||:|||:||
RBAM_006380__     51 EKDGCLAGYCGIWIIIDDAQITNIAIKPEYRGQSLGEALFRSAIELCREK    100

BSNT_01035___    101 DARRLSLEVRVSNHPAQGLYKKFGMQPGGIRKNYYTDNGEDALIMWVTIN    150
                     .||||||||||||||||.||||||:|.|||||.||||||||||:||||::
RBAM_006380__    101 KARRLSLEVRVSNHPAQSLYKKFGLQAGGIRKQYYTDNGEDALLMWVTLH    150

BSNT_01035___    151 E    151
                     |
RBAM_006380__    151 E    151


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