Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01035 and RBAM_006380

See Amino acid alignment / Visit BSNT_01035 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:42
# Commandline: needle
#    -asequence dna-align/BSNT_01035___ydiD.1.9828.seq
#    -bsequence dna-align/RBAM_006380___ydiD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01035___ydiD-RBAM_006380___ydiD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01035___ydiD-RBAM_006380___ydiD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01035___ydiD
# 2: RBAM_006380___ydiD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 456
# Identity:     363/456 (79.6%)
# Similarity:   363/456 (79.6%)
# Gaps:           0/456 ( 0.0%)
# Score: 1443.0
# 
#
#=======================================

BSNT_01035___      1 ATGAAAACAAAAGCAGCGGTCAGAAATATGCGGCTTGAAGATATAGATCA     50
                     ||||||||.|||.|.|||.|..|||..|||||.|..||||||||.|||||
RBAM_006380__      1 ATGAAAACGAAAACGGCGATTCGAAGCATGCGTCCGGAAGATATTGATCA     50

BSNT_01035___     51 CGTATACGAAATCGAAGCATCCTCCTTTACGTCTCCTTGGACGAAGGATT    100
                     ..|.||.|||||.|||.||.|.||||||||.|||||.|||||||||||||
RBAM_006380__     51 AATTTATGAAATTGAAACAGCATCCTTTACTTCTCCGTGGACGAAGGATT    100

BSNT_01035___    101 CGTTTTATCATGAGCTGCTGGAAAATCCGTATGCTCATTATCTCGTGATT    150
                     |.||||||||||||||..||||||||||||||||.||.||.||.||.|||
RBAM_006380__    101 CATTTTATCATGAGCTTTTGGAAAATCCGTATGCCCACTACCTTGTCATT    150

BSNT_01035___    151 GAAAAGGACGGCTATCTTGCTGGGTATTGCGGGATTTGGATTGTGATGGA    200
                     |||||||||||||.|||.||.|||||||||||.||.||||||.|.||.||
RBAM_006380__    151 GAAAAGGACGGCTGTCTGGCGGGGTATTGCGGAATCTGGATTATTATAGA    200

BSNT_01035___    201 CGATGCCCAAATTACAAATATAGCGATAAAACCAGAGTATCGCGGCCAGT    250
                     .||.||.||.|||||.||.|||||.||.||.||.||.|||||.|||||.|
RBAM_006380__    201 TGACGCGCAGATTACGAACATAGCCATTAAGCCGGAATATCGGGGCCAAT    250

BSNT_01035___    251 CTTTAGGAGAAACGCTTTTTCGCTCAGCTGTTGAACTGTGCAAAGAAAAA    300
                     |.||.||||||.||||.||||||||.||..|.|||.||||||.|||||||
RBAM_006380__    251 CATTGGGAGAAGCGCTGTTTCGCTCTGCGATAGAATTGTGCAGAGAAAAA    300

BSNT_01035___    301 GACGCAAGGCGGCTTTCGCTTGAAGTGAGGGTTTCGAATCATCCTGCTCA    350
                     .|.|||||..||||.||.||.|||||.|||||.||.||||||||.||.||
RBAM_006380__    301 AAGGCAAGAAGGCTCTCTCTCGAAGTCAGGGTCTCAAATCATCCCGCCCA    350

BSNT_01035___    351 AGGCTTATATAAGAAATTCGGGATGCAGCCCGGCGGAATAAGAAAGAACT    400
                     |..|||||||||.||||||||..|.|||.||||.|||||.|||||..|.|
RBAM_006380__    351 ATCCTTATATAAAAAATTCGGTCTTCAGGCCGGAGGAATCAGAAAACAAT    400

BSNT_01035___    401 ATTATACTGATAACGGGGAAGATGCGTTAATTATGTGGGTGACGATAAAT    450
                     |.|||||.||||||||.||||||||||||.|.|||||||||||..||.||
RBAM_006380__    401 ACTATACAGATAACGGAGAAGATGCGTTATTAATGTGGGTGACATTACAT    450

BSNT_01035___    451 GAGTGA    456
                     ||||||
RBAM_006380__    451 GAGTGA    456


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