Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01032 and RBAM_006370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:42
# Commandline: needle
# -asequence pep-align/BSNT_01032___ydiC.1.9828.seq
# -bsequence pep-align/RBAM_006370___ydiC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01032___ydiC-RBAM_006370___ydiC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01032___ydiC-RBAM_006370___ydiC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01032___ydiC
# 2: RBAM_006370___ydiC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity: 182/229 (79.5%)
# Similarity: 203/229 (88.6%)
# Gaps: 0/229 ( 0.0%)
# Score: 950.0
#
#
#=======================================
BSNT_01032___ 1 MTILAIDTSNYTLGIALLREDTVIAEYITYLKKNHSVRAMPAVHSLLNDC 50
||||||||||||||.||:|:.||:|||||||||||||||||||:|||.||
RBAM_006370__ 1 MTILAIDTSNYTLGAALVRDKTVMAEYITYLKKNHSVRAMPAVNSLLKDC 50
BSNT_01032___ 51 DMAPQDLSKIVVAKGPGSYTGVRIGVTLAKTLAWSLDIPISAVSSLETLA 100
.:.||||:||.|||||||||||||||||||||||||.:|:|||||||.||
RBAM_006370__ 51 GLTPQDLTKIAVAKGPGSYTGVRIGVTLAKTLAWSLKLPVSAVSSLEVLA 100
BSNT_01032___ 101 ANGRHFDGLISPIFDARRGQVYTGLYQYKNGLLEQVVPDQNVMLADWLEM 150
||||||.|||.|:|||||||||||||:|::|.|:.|:|||||:|.|||.|
RBAM_006370__ 101 ANGRHFQGLICPLFDARRGQVYTGLYEYQDGRLQSVLPDQNVLLTDWLGM 150
BSNT_01032___ 151 LKEKGRPVLFLGHDTSIHKQMIKDVLRTKGFIGTAAQHNPRPSELAFLGK 200
||||..|||||||||:||::.|...|.::..||||||||||||||||||.
RBAM_006370__ 151 LKEKASPVLFLGHDTAIHEETILHELTSQAVIGTAAQHNPRPSELAFLGL 200
BSNT_01032___ 201 EKEAADVHGLVPDYLRLAEAEAKWIESQK 229
|||.||||.|||||||||||||||:||||
RBAM_006370__ 201 EKEEADVHSLVPDYLRLAEAEAKWMESQK 229
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