Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01030 and RBAM_006350

See DNA alignment / Visit BSNT_01030 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:41
# Commandline: needle
#    -asequence pep-align/BSNT_01030___thiL.1.9828.seq
#    -bsequence pep-align/RBAM_006350___thiL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01030___thiL-RBAM_006350___thiL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01030___thiL-RBAM_006350___thiL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01030___thiL
# 2: RBAM_006350___thiL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 326
# Identity:     228/326 (69.9%)
# Similarity:   266/326 (81.6%)
# Gaps:           2/326 ( 0.6%)
# Score: 1162.0
# 
#
#=======================================

BSNT_01030___      1 MDEFDLIHSITPRTIHHSSVDVGIGDDAALYTAKHGVQEIVCVDTMVEDV     50
                     ||||||||||||.:.:|.|||||||||.|:|||...:|:|||:|||||:|
RBAM_006350__      1 MDEFDLIHSITPHSHYHPSVDVGIGDDGAVYTASPHMQQIVCLDTMVENV     50

BSNT_01030___     51 HFKLHYSSPEDIGYKALAVNISDIAAMGGIPKFYLVSLAVPSKWTASEIK    100
                     ||||.||||.|||||||||||||:||||||||||||||||||.|..::::
RBAM_006350__     51 HFKLEYSSPHDIGYKALAVNISDVAAMGGIPKFYLVSLAVPSCWQKADVQ    100

BSNT_01030___    101 AMYEGMNELAKLYQMDLIGGDTVSTADKLVVTVTVIGEVEKGRACLRSLA    150
                     ||||||.|||||||||||||||||.:.:.|:||||||||||..|||||.|
RBAM_006350__    101 AMYEGMAELAKLYQMDLIGGDTVSASGQAVITVTVIGEVEKDCACLRSSA    150

BSNT_01030___    151 RPNDVVFVTGEIGSSAAGLSLLLEETNPQNSSVETDYFIHRHKRPEPRVS    200
                     ||.|||||||:||||||||||||.||.| ::...|||||.:||||.|||.
RBAM_006350__    151 RPGDVVFVTGDIGSSAAGLSLLLGETLP-SAFHTTDYFIRKHKRPVPRVQ    199

BSNT_01030___    201 VGRLCSIFKRAALNDVSDGLASELNEIAEASCVSIEIDESMLPIHSDLPK    250
                     |||.||..:||||||:||||||||:|||.||.|:|||:|.:||:|.|||:
RBAM_006350__    200 VGRFCSQLQRAALNDISDGLASELHEIAGASSVTIEIEEQLLPVHPDLPE    249

BSNT_01030___    251 LHPNWKEWALFGGEDFELTGTVSKEEWEVLKQQCAARQLPITKIGHVREK    300
                     .:..||:|.|||||||||.||||::||..|...|....:||.|||.|.|:
RBAM_006350__    250 ANSEWKKWVLFGGEDFELVGTVSQQEWISLLDYCTQSGIPIAKIGAVSER    299

BSNT_01030___    301 TKSKVIL-KTDQTSMILEKKGYNHFK    325
                     .::.|:| ..||..::||||||||||
RBAM_006350__    300 KEACVLLTANDQRQIVLEKKGYNHFK    325


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