Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01069 and RBAM_006270

See DNA alignment / Visit BSNT_01069 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:44
# Commandline: needle
#    -asequence pep-align/BSNT_01069___ydjK.1.9828.seq
#    -bsequence pep-align/RBAM_006270___ydjK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01069___ydjK-RBAM_006270___ydjK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01069___ydjK-RBAM_006270___ydjK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01069___ydjK
# 2: RBAM_006270___ydjK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 473
# Identity:     373/473 (78.9%)
# Similarity:   429/473 (90.7%)
# Gaps:           1/473 ( 0.2%)
# Score: 1940.0
# 
#
#=======================================

BSNT_01069___      1 MNKQGNQMSFLRTIILVSTFGGLLFGYDTGVLNGALPYMGEPDQLNLNAF     50
                     |||..:|.|||||||||||||||||||||||:|||||:|.|.|||||.|.
RBAM_006270__      1 MNKNSSQHSFLRTIILVSTFGGLLFGYDTGVINGALPFMAEADQLNLTAL     50

BSNT_01069___     51 TEGLVTSSLLFGAALGAVFGGRMSDFNGRRKNILFLAVIFFISTIGCTFA    100
                     |||:|.||||.|||:|||||||:||:||||||||.|||:||.:|:|||.|
RBAM_006270__     51 TEGMVASSLLLGAAIGAVFGGRLSDYNGRRKNILILAVLFFAATLGCTLA    100

BSNT_01069___    101 PNVTVMIISRFVLGIAVGGASVTVPAYLAEMSPVESRGRMVTQNELMIVS    150
                     |||:||:||||:||:||||||||||||||||||.|||||||||||||||:
RBAM_006270__    101 PNVSVMVISRFLLGLAVGGASVTVPAYLAEMSPAESRGRMVTQNELMIVT    150

BSNT_01069___    151 GQLLAFVFNAILGTTMGENSHVWRFMLVIASLPALFLFFGMIRMPESPRW    200
                     ||||||..|||:|..:|:.||.||:|||||:|||:||||||:::||||||
RBAM_006270__    151 GQLLAFTCNAIIGNVLGDTSHAWRYMLVIAALPAVFLFFGMLKVPESPRW    200

BSNT_01069___    201 LVSKGRKEDALRVLKKIRDEKRAAAELQEIEFAFKKEDQLEKATFKDLSV    250
                     |||||||||||.||::||:|::|.:||.|||.||.||.::|:|.||||:|
RBAM_006270__    201 LVSKGRKEDALHVLRRIRNEEKAKSELAEIESAFHKEAEMEQAAFKDLAV    250

BSNT_01069___    251 PWVRRIVFIGLGIAIVQQITGVNSIMYYGTEILRNSGFQTEAALIGNIAN    300
                     ||||||||||:|||:|||:|||||||||||:||:::||:|:|||||||||
RBAM_006270__    251 PWVRRIVFIGIGIAVVQQLTGVNSIMYYGTQILKDAGFETKAALIGNIAN    300

BSNT_01069___    301 GVISVLATFVGIWLLGRVGRRPMLMTGLIGTTTALLLIGIFSLVLEGSPA    350
                     ||||||||||||||||:|||||||||||||||..|||||:.|:||:||||
RBAM_006270__    301 GVISVLATFVGIWLLGKVGRRPMLMTGLIGTTAVLLLIGVLSVVLKGSPA    350

BSNT_01069___    351 LPYVVLSLTVTFLAFQQGAISPVTWLMLSEIFPLRLRGLGMGVTVFCLWM    400
                     |||||||||||||||||||:|||||||||||||||||||||||||||||:
RBAM_006270__    351 LPYVVLSLTVTFLAFQQGAVSPVTWLMLSEIFPLRLRGLGMGVTVFCLWI    400

BSNT_01069___    401 VNFAVSFTFPILLAAIGLSTTFFIFVGLGICSVLFVKRFLPETKGLSLEQ    450
                     |||.|.||||:|||.||||.||||||.|||.||:||||||||||||||||
RBAM_006270__    401 VNFLVGFTFPVLLANIGLSATFFIFVLLGIASVIFVKRFLPETKGLSLEQ    450

BSNT_01069___    451 LEENFRAYDHGGAKKDSGAEVIG    473
                     ||:|||.|:... :..:.|:|.|
RBAM_006270__    451 LEQNFRTYEKTD-RNSAEAKVSG    472


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