Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05208 and RBAM_006220
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:42
# Commandline: needle
# -asequence pep-align/BSNT_05208___yvdT.1.9828.seq
# -bsequence pep-align/RBAM_006220___yvdT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05208___yvdT-RBAM_006220___yvdT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05208___yvdT-RBAM_006220___yvdT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05208___yvdT
# 2: RBAM_006220___yvdT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 156/194 (80.4%)
# Similarity: 169/194 (87.1%)
# Gaps: 1/194 ( 0.5%)
# Score: 791.0
#
#
#=======================================
BSNT_05208___ 1 MPKQTSGKYEKILQAAIEVISEKGLDKASISDIVKKAGTAQGTFYLYFSS 50
|.||:||||||||||||||||||||||||||:||||||||||||||||||
RBAM_006220__ 1 MAKQSSGKYEKILQAAIEVISEKGLDKASISEIVKKAGTAQGTFYLYFSS 50
BSNT_05208___ 51 KNALIPAIAENLLTHTLDQIKGRLHGDEDFWTVLDILIDETFLITERHKD 100
|||||.|||||||..|||:|||:..|.|||||:||||:||||.||..|||
RBAM_006220__ 51 KNALISAIAENLLDTTLDRIKGKTDGSEDFWTLLDILVDETFHITRLHKD 100
BSNT_05208___ 101 IIVLCYSGLAIDHSMEKWETIYQPYYSWLEQIINKAIANHEVTEGINSKW 150
|||||||||||||||||||.||||||||||.:||.||...||..||:.:|
RBAM_006220__ 101 IIVLCYSGLAIDHSMEKWEAIYQPYYSWLEGVINTAIEQGEVHSGIHVRW 150
BSNT_05208___ 151 TARTIINLVENTAERFYIGFEQDENVEVYKKEIFTFLKRSLGTA 194
|||||||:|||.|||||||.|||.::||||||||:||||||..
RBAM_006220__ 151 TARTIINVVENAAERFYIGCEQDVDLEVYKKEIFSFLKRSLQK- 193
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