Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05209 and RBAM_006210

See DNA alignment / Visit BSNT_05209 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:42
# Commandline: needle
#    -asequence pep-align/BSNT_05209___yvdS.1.9828.seq
#    -bsequence pep-align/RBAM_006210___yvdS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05209___yvdS-RBAM_006210___yvdS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05209___yvdS-RBAM_006210___yvdS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05209___yvdS
# 2: RBAM_006210___yvdS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 111
# Identity:      86/111 (77.5%)
# Similarity:   102/111 (91.9%)
# Gaps:           2/111 ( 1.8%)
# Score: 440.5
# 
#
#=======================================

BSNT_05209___      1 MNWVLVFIAGLLEVVWASSLKHADSLLDWIIIFILIAVSFILLIRSYQKI     50
                     |.|:||.|||||||||||:|||||||.|||.||:||||||::|||||:||
RBAM_006210__      1 MYWLLVLIAGLLEVVWASALKHADSLFDWIGIFLLIAVSFLMLIRSYKKI     50

BSNT_05209___     51 PMAAAYTVFVGIGTVGTYLTGIVLGESFSAAQMFFLALLLAGILGMKLFT    100
                     ||||||||||||||||||:||::||||||..|:|||||||:||||||:||
RBAM_006210__     51 PMAAAYTVFVGIGTVGTYVTGVILGESFSIGQIFFLALLLSGILGMKVFT    100

BSNT_05209___    101 KESKSQPGGEQ    111
                     ||::::  ||.
RBAM_006210__    101 KETETR--GEH    109


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.