Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01008 and RBAM_006170

See DNA alignment / Visit BSNT_01008 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:41
# Commandline: needle
#    -asequence pep-align/BSNT_01008___ydhQ.1.9828.seq
#    -bsequence pep-align/RBAM_006170___ydhQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01008___ydhQ-RBAM_006170___ydhQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01008___ydhQ-RBAM_006170___ydhQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01008___ydhQ
# 2: RBAM_006170___ydhQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 238
# Identity:     194/238 (81.5%)
# Similarity:   217/238 (91.2%)
# Gaps:           1/238 ( 0.4%)
# Score: 1019.0
# 
#
#=======================================

BSNT_01008___      1 MNKYEIIANEMRNRIKNNVYPIDQPIPDEVSLAKEFNSSRMTMKRALDNL     50
                     |||||.||||||.|||::||.||||||||.:||.||..||||||||||.|
RBAM_006170__      1 MNKYEKIANEMRKRIKSSVYDIDQPIPDEKTLAAEFGCSRMTMKRALDTL     50

BSNT_01008___     51 VAEGLLFRKRGHGTFIIQSAIQDDHVHVVSNEILGLTNLLKDKKIQSKVI    100
                     .|||:|||||||||||||||:||:||||||||||||:||||.|.|:||||
RBAM_006170__     51 AAEGMLFRKRGHGTFIIQSAMQDEHVHVVSNEILGLSNLLKGKNIKSKVI    100

BSNT_01008___    101 QFKVQFPTEEVAAHLSIDQKTPVYYVVRLRIVEGEPYVLEKTYMPTHLIP    150
                     :|:||||:::|||||:||:||||||||||||||||||||||||||..|||
RBAM_006170__    101 RFEVQFPSQDVAAHLAIDEKTPVYYVVRLRIVEGEPYVLEKTYMPASLIP    150

BSNT_01008___    151 GINDDVLHDSIYNHITNVLQLKIAGTHRKIRACKSDHIDQQHLGCKQDDP    200
                     ||||:||:.|||:|||..|||||||:||||||||||.:|||:|||:.|||
RBAM_006170__    151 GINDEVLNHSIYDHITRELQLKIAGSHRKIRACKSDDMDQQYLGCRPDDP    200

BSNT_01008___    201 ILEVEHVGFLDTGIPFEYSFSRHRHDKFVVTSVNIRR-    237
                     |||||||||||.|.|||||||||||||||||||||:| 
RBAM_006170__    201 ILEVEHVGFLDNGTPFEYSFSRHRHDKFVVTSVNIKRS    238


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