Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02069 and RBAM_006120

See DNA alignment / Visit BSNT_02069 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:46
# Commandline: needle
#    -asequence pep-align/BSNT_02069___yjiA.1.9828.seq
#    -bsequence pep-align/RBAM_006120___yjiA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02069___yjiA-RBAM_006120___yjiA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02069___yjiA-RBAM_006120___yjiA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02069___yjiA
# 2: RBAM_006120___yjiA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 92
# Identity:      38/92 (41.3%)
# Similarity:    60/92 (65.2%)
# Gaps:           8/92 ( 8.7%)
# Score: 186.5
# 
#
#=======================================

BSNT_02069___      1 MAAQTDYKKQVVGILLSLAFVLFVFSFSERHEKPLVEGKKQENWHTVVDK     50
                     |:|..:.:|..|..:|...|.:|||||||.|        .|:||||.||:
RBAM_006120__      1 MSAAGNRQKFWVMAMLIAVFAVFVFSFSENH--------SQKNWHTAVDQ     42

BSNT_02069___     51 ASVKIYGSRLVEENKLKQKLGHKQADSILTLLKLANEKHITL     92
                     |||.::|.::.|:::|.:.|..::|:|:|||:||||.:|..:
RBAM_006120__     43 ASVNVFGQQIFEKDRLAKTLDAREAESLLTLVKLANAEHHII     84


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