Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00986 and RBAM_006110
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:40
# Commandline: needle
# -asequence pep-align/BSNT_00986___ydhE.1.9828.seq
# -bsequence pep-align/RBAM_006110___ydhE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00986___ydhE-RBAM_006110___ydhE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00986___ydhE-RBAM_006110___ydhE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00986___ydhE
# 2: RBAM_006110___ydhE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 397
# Identity: 293/397 (73.8%)
# Similarity: 340/397 (85.6%)
# Gaps: 2/397 ( 0.5%)
# Score: 1552.0
#
#
#=======================================
BSNT_00986___ 1 -MKTVLILNFPAEGHVNPTLGITKAFSDKGYDVHYISTEKYKKRLEAAGA 49
.|.:|::|||||||||||||:|||||::|..||||||||||.|||..||
RBAM_006110__ 1 MAKHILMINFPAEGHVNPTLGMTKAFSERGDHVHYISTEKYKSRLEGVGA 50
BSNT_00986___ 50 TVHLHRDLLRTTPIHVGSPNGILDFVKIHIKTSLDILQIVKDLSKSIQFD 99
.||||.||||.|||..|||:|||.|:|:||||||:||.||:.|::.||||
RBAM_006110__ 51 KVHLHSDLLRMTPIDPGSPSGILAFLKVHIKTSLEILHIVQRLAEDIQFD 100
BSNT_00986___ 100 FVYYDKFGAGELVRDYLDIPGVSSSASFLFGEEHLKILPLHPESGAPLEL 149
.||||||||||||||||:|||:||||||||.|:.|||||||||||.|.:.
RBAM_006110__ 101 AVYYDKFGAGELVRDYLNIPGISSSASFLFNEDRLKILPLHPESGVPFQP 150
BSNT_00986___ 150 DQECEDLLAKMKETYGVAPKNLVQFMNNKGELNVVYTSRYFQPESDRFGD 199
|:|||:|||:||:.|||||.::||||||.||||||||||||||||:.|||
RBAM_006110__ 151 DRECEELLAEMKDKYGVAPDSMVQFMNNTGELNVVYTSRYFQPESETFGD 200
BSNT_00986___ 200 ECLFIGPSFPKRAEKTDFPIEQLKDESVIYISMGTVLDHTEDFFNLCIDA 249
|.||||||||||..:.||||:.||:|.||||||||||..||.||||||||
RBAM_006110__ 201 EYLFIGPSFPKRKGRVDFPIDSLKNEKVIYISMGTVLGDTEAFFNLCIDA 250
BSNT_00986___ 250 FSGFNGKVVIAAGEKADLTKLKQAPENFIIAPYVPQLEVLEQSDVFITHG 299
||.|.|||||||||||||:|:|||||||||||||||||||||:|||:|||
RBAM_006110__ 251 FSDFEGKVVIAAGEKADLSKIKQAPENFIIAPYVPQLEVLEQADVFVTHG 300
BSNT_00986___ 300 GMNSVNEGIHFSVPLVVMPHDKDQPMVAQRLSELHAGYVISKDEVNAQIL 349
||||||||||:.|||||:||||||||||:||:||.|||.:.||||:|:.:
RBAM_006110__ 301 GMNSVNEGIHYQVPLVVIPHDKDQPMVARRLTELDAGYTVQKDEVSAEKV 350
BSNT_00986___ 350 KQAVDEVLRNDQYMAGIKKINQSFKECMDMEEVMERIDELIRQKNK- 395
|.|.:|||.|.:|..||:.||:|||||.||::|:.|||..|.||:.
RBAM_006110__ 351 KLAAEEVLHNGKYKQGIQAINESFKECTDMKDVLARIDRFIEQKHAQ 397
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