Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00983 and RBAM_006100
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:40
# Commandline: needle
# -asequence pep-align/BSNT_00983___ydhC.1.9828.seq
# -bsequence pep-align/RBAM_006100___ydhC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00983___ydhC-RBAM_006100___ydhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00983___ydhC-RBAM_006100___ydhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00983___ydhC
# 2: RBAM_006100___ydhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 228
# Identity: 159/228 (69.7%)
# Similarity: 183/228 (80.3%)
# Gaps: 4/228 ( 1.8%)
# Score: 810.5
#
#
#=======================================
BSNT_00983___ 1 MDDFKLDKPTPYYLQFYNQLKKMIFNGTFKPGERINETQLAKSFGVSRSP 50
||:||||||.|||||||:|||||||:|.||||||:|||||||.|||||||
RBAM_006100__ 1 MDNFKLDKPIPYYLQFYSQLKKMIFDGIFKPGERLNETQLAKDFGVSRSP 50
BSNT_00983___ 51 IREAMRLLEKDGLLKADDRNGFSITSLTAKDVDEIYKIRIPLEQLAVELV 100
:|||||||||||||.|||||||.|.||:.|||:||||||:.||.||||||
RBAM_006100__ 51 VREAMRLLEKDGLLTADDRNGFVIYSLSVKDVEEIYKIRMSLESLAVELV 100
BSNT_00983___ 101 IDEADEEELTILEKQLEETEKAIRNGTEDTEIIRLNQKFHELLVDFSHNR 150
||||.|.|:.::||||.|||:||..|.::||||.||:.||.||||||.|.
RBAM_006100__ 101 IDEAAESEIDLIEKQLRETEEAINKGVKETEIISLNESFHRLLVDFSRNS 150
BSNT_00983___ 151 HLKNLLEHVNDLIHFCRILNYTGDHRAETILREHRRIFEEVKKKNKEAAK 200
.|..||||||.||||||:||:.||.|||.||.|||::|||:||.:|..|.
RBAM_006100__ 151 RLAMLLEHVNVLIHFCRVLNFKGDDRAEVILHEHRKVFEEIKKGDKTKAV 200
BSNT_00983___ 201 QHVLAHFNHDCEHLKHVL--EEGKEN-- 224
|::..|..||.||||.|| ||..|:
RBAM_006100__ 201 QYMTEHLKHDEEHLKGVLRAEETDESSR 228
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