Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03867 and RBAM_006040

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:10
# Commandline: needle
#    -asequence pep-align/BSNT_03867___bltD.1.9828.seq
#    -bsequence pep-align/RBAM_006040___bltD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03867___bltD-RBAM_006040___bltD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03867___bltD-RBAM_006040___bltD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03867___bltD
# 2: RBAM_006040___bltD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 152
# Identity:     103/152 (67.8%)
# Similarity:   131/152 (86.2%)
# Gaps:           0/152 ( 0.0%)
# Score: 587.0
# 
#
#=======================================

BSNT_03867___      1 MSINIKAVTDDNRAAILDLHVSQNQLSYIESTKVCLEDAKECHYYKPVGL     50
                     |:|.|:.||::|||.||.|||.::|.|:||:.:.||:||::|.:|:|.||
RBAM_006040__      1 MTIEIRTVTEENRADILALHVRESQTSFIETVEECLQDAEDCRHYQPAGL     50

BSNT_03867___     51 YYEGDLVGFAMYGLFPEYDEDNKNGRVWLDRFFIDKHYQGKGLGKKMLKA    100
                     |..|:||||||||.||||||:|:||||||||||||:.|||:||||.:|.|
RBAM_006040__     51 YVNGELVGFAMYGWFPEYDEENENGRVWLDRFFIDERYQGRGLGKLLLDA    100

BSNT_03867___    101 LIQHLAELYKCKRIYLSIFENNIHAIRLYQRFGFQFNGELDFNGEKVMVK    150
                     ||:||..:|.|:|||||:||:|:||:||||:|||.||||||.||||||||
RBAM_006040__    101 LIRHLVRIYDCRRIYLSLFEDNVHALRLYQKFGFLFNGELDSNGEKVMVK    150

BSNT_03867___    151 EL    152
                     ||
RBAM_006040__    151 EL    152


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