Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03073 and RBAM_005970
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:57
# Commandline: needle
# -asequence pep-align/BSNT_03073___yoaA.1.9828.seq
# -bsequence pep-align/RBAM_005970___ynaD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03073___yoaA-RBAM_005970___ynaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03073___yoaA-RBAM_005970___ynaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03073___yoaA
# 2: RBAM_005970___ynaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 53/193 (27.5%)
# Similarity: 86/193 (44.6%)
# Gaps: 34/193 (17.6%)
# Score: 171.5
#
#
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BSNT_03073___ 1 MFPILETDRLTLRQITDQDAEAIFACFSNDEVTRYY--GLENMESIEQAI 48
..::||||.:|....:|.:.::|..||..|.:|. |:...|.:.:.:
RBAM_005970__ 1 --MNIKTDRLIIRTFEPEDWQDVYAYTSNPNVMKYIPEGVFTEEDVRKFV 48
BSNT_03073___ 49 SMIQTFAALYQEKRGIRWG---IERRDTKELIGTIGFHALAQKHRRAEIG 95
: |..|...| :..:|.|.:||.|.|......| ..|||
RBAM_005970__ 49 T----------ENSGEHAGKFPVLLKDEKTVIGHIAFFQYFGDH-TYEIG 87
BSNT_03073___ 96 YEIIPEHWRNGFASEVISKVVSYGFSALGLSRIGAVVFTANEASNRLLLK 145
:...||:...|:|||....|:::||:.:.|.||.|.....|.||:|::.|
RBAM_005970__ 88 WVFHPEYQGKGYASEAARAVLAFGFNKMKLHRIIATCQPENMASHRVMEK 137
BSNT_03073___ 146 MGFQKEGVLRQYMYQNGIPYDT----NVYSIVKPRE------- 177
:|.::|| .::..||:|. ..|..|...|
RBAM_005970__ 138 IGMRREG-----FFKKCIPHDNEWWDEYYYAVLEEEWEASNLE 175
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