Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00934 and RBAM_005940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:38
# Commandline: needle
# -asequence pep-align/BSNT_00934___ydfJ.1.9828.seq
# -bsequence pep-align/RBAM_005940___ydfJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00934___ydfJ-RBAM_005940___ydfJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00934___ydfJ-RBAM_005940___ydfJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00934___ydfJ
# 2: RBAM_005940___ydfJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 724
# Identity: 550/724 (76.0%)
# Similarity: 608/724 (84.0%)
# Gaps: 43/724 ( 5.9%)
# Score: 2766.0
#
#
#=======================================
BSNT_00934___ 1 ------------------------------------MKPSFSEDMSIPDT 14
:||:||||||||||
RBAM_005940__ 1 MSGFLYKLGGWSARNRLKMISAWLVILIASVVIAISLKPAFSEDMSIPDT 50
BSNT_00934___ 15 PSEKAMDVIQKEFPHGPDKGSIRVIFGAGDGEKLTGKPAKKAIEDTLKEI 64
|||||||:|||||..|||||||||||||.||:|||.||.|:|:|:|||:|
RBAM_005940__ 51 PSEKAMDIIQKEFSKGPDKGSIRVIFGAEDGKKLTSKPEKQAVEETLKKI 100
BSNT_00934___ 65 SKDDSVDSIASPFVTGTIAKDGTVAYADIKYKSSADDIKDYSIKHLKDSL 114
..|.||.||||||.||||:|||:|||||:.||.:||||.|.|:.|:|.||
RBAM_005940__ 101 KTDHSVASIASPFETGTISKDGSVAYADVSYKKAADDITDASVSHMKHSL 150
BSNT_00934___ 115 KLVDDEGLQTELSGDVPGAEMEIGSVSEIVGIILAFVVLAITLGSLLIAG 164
....|:|||||||||||||.:|||.||||||::|||||||||.|||:|||
RBAM_005940__ 151 SAAGDKGLQTELSGDVPGAGVEIGGVSEIVGVVLAFVVLAITFGSLVIAG 200
BSNT_00934___ 165 LPILTALIGLGVSIGLVLIGTQVFDIASVSLSLAGMIGLAVGIDYALFIF 214
|||:||||||||||.|.|||||.|.||||||||:||||||||||||||||
RBAM_005940__ 201 LPIVTALIGLGVSIALTLIGTQFFTIASVSLSLSGMIGLAVGIDYALFIF 250
BSNT_00934___ 215 TKHRQFLGEGIQKNESIARAVGTAGSAVVFAGLTVIVALCGLTVVNIPFM 264
||||||||||:|||||||:|.||||||||||||||||||||||||.||||
RBAM_005940__ 251 TKHRQFLGEGVQKNESIAKAAGTAGSAVVFAGLTVIVALCGLTVVGIPFM 300
BSNT_00934___ 265 SAMGLTAGLSVLMAVLASITLVPAVLSIAGKRMIPKSNKKIEKQSTETNV 314
|||||||.||||||||||:||||||||||||||||||.||.||:|..||.
RBAM_005940__ 301 SAMGLTAALSVLMAVLASVTLVPAVLSIAGKRMIPKSYKKKEKKSAGTNG 350
BSNT_00934___ 315 WGRFVTKNPIILSVCSILILIVISIPSMHLELGLPDAGMKAKDNPDRRAY 364
|||||||.||:||:.||::|.|||:|:||||||||||||||||:||||||
RBAM_005940__ 351 WGRFVTKKPILLSIFSIILLAVISLPAMHLELGLPDAGMKAKDSPDRRAY 400
BSNT_00934___ 365 ALLAEGFGEGFNGQLTIVADATNATENKAEAFADAVKEIKGLDHVASVTP 414
.||::||||||||:|||||||.....||:|||..||||:|.|.:||||||
RBAM_005940__ 401 DLLSKGFGEGFNGKLTIVADAKGVKGNKSEAFQGAVKEMKDLHNVASVTP 450
BSNT_00934___ 415 AMPNKEGNFAIITVVPETGPNDVTTKDLVHDVRSLSDKNGVDLLVTGSTA 464
||||::|::||||.||||||||..||:||.|:|..|||||:.||||||||
RBAM_005940__ 451 AMPNEKGDYAIITAVPETGPNDKATKELVQDIRKRSDKNGIRLLVTGSTA 500
BSNT_00934___ 465 VNIDISDRLNDAIPVFAVLIVGFAFVLLTIVFRSLLVPLVAVAGFMLTMT 514
||||||||||||||.||:|||||||||||:|||||||||.||.||:||||
RBAM_005940__ 501 VNIDISDRLNDAIPEFAILIVGFAFVLLTVVFRSLLVPLAAVVGFLLTMT 550
BSNT_00934___ 515 ATLGICVFVLQDGNLIDFFKIPEKGPILAFLPILSIGILFGLAMDYQVFL 564
||||:.||||||||......||||||||||||||:|||||||||||||||
RBAM_005940__ 551 ATLGLSVFVLQDGNFTGLLSIPEKGPILAFLPILAIGILFGLAMDYQVFL 600
BSNT_00934___ 565 VSRMREEYVKTKNPVQAIQAGLKHSGPVVTAAGLIMIFVFAGFIFAGEAS 614
||||||||||||||||||.||||||||||||||||||||||||||||||:
RBAM_005940__ 601 VSRMREEYVKTKNPVQAIHAGLKHSGPVVTAAGLIMIFVFAGFIFAGEAT 650
BSNT_00934___ 615 IKANGLALSFGVLFDAFIVRMTLIPSVMKLMGNAAWYLPKWLDKIIPNVD 664
||:.|||::|||||||||||||:|||||||||:|||||||||||||||||
RBAM_005940__ 651 IKSMGLAMTFGVLFDAFIVRMTIIPSVMKLMGHAAWYLPKWLDKIIPNVD 700
BSNT_00934___ 665 IEGHQLTKEIQPEIDHEQKKQISV 688
||||:||:...||...|
RBAM_005940__ 701 IEGHKLTQGKTPEKPEE------- 717
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