Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00932 and RBAM_005930
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:38
# Commandline: needle
# -asequence pep-align/BSNT_00932___ydfI.1.9828.seq
# -bsequence pep-align/RBAM_005930___ydfI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00932___ydfI-RBAM_005930___ydfI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00932___ydfI-RBAM_005930___ydfI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00932___ydfI
# 2: RBAM_005930___ydfI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity: 172/213 (80.8%)
# Similarity: 191/213 (89.7%)
# Gaps: 2/213 ( 0.9%)
# Score: 850.5
#
#
#=======================================
BSNT_00932___ 1 MNKVLIVDDHLVVREGLKLLIETNDQYTIIGEAENGKVAVRLADELEPDI 50
|.||||.||||||||||||||||||.|||.|||||||.|||||:||:||:
RBAM_005930__ 1 MYKVLIADDHLVVREGLKLLIETNDHYTITGEAENGKTAVRLAEELKPDV 50
BSNT_00932___ 51 ILMDLYMPEMSGLEAIKQIKEKHDTPIIILTTYNEDHLMIEGIELGAKGY 100
|||||||||||||||||||||..|.|||||||||||||||||||.||.||
RBAM_005930__ 51 ILMDLYMPEMSGLEAIKQIKEHSDVPIIILTTYNEDHLMIEGIESGANGY 100
BSNT_00932___ 101 LLKDTSSETLFHTMDAAIRGNVLLQPDILKRLQEIQFERMKKQRSETQLT 150
|||||||||||||||||:||.||||||||:|.:|::.|| ...:|||||
RBAM_005930__ 101 LLKDTSSETLFHTMDAAVRGEVLLQPDILRRFREMKMER--ANANETQLT 148
BSNT_00932___ 151 EKEVIVLKAIAKGLKSKAIAFDLDVSERTVKSRLTSIYNKLGANSRTEAV 200
:||:|||:|:|:|.|||||||||.:||||||:|||||||||||:||||||
RBAM_005930__ 149 DKEIIVLEAVAQGHKSKAIAFDLGISERTVKARLTSIYNKLGADSRTEAV 198
BSNT_00932___ 201 TIAMQKGILTIDN 213
|||||||||.::.
RBAM_005930__ 199 TIAMQKGILKLNI 211
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