Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00932 and RBAM_005930

See Amino acid alignment / Visit BSNT_00932 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:38
# Commandline: needle
#    -asequence dna-align/BSNT_00932___ydfI.1.9828.seq
#    -bsequence dna-align/RBAM_005930___ydfI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00932___ydfI-RBAM_005930___ydfI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00932___ydfI-RBAM_005930___ydfI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00932___ydfI
# 2: RBAM_005930___ydfI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 647
# Identity:     497/647 (76.8%)
# Similarity:   497/647 (76.8%)
# Gaps:          16/647 ( 2.5%)
# Score: 1895.5
# 
#
#=======================================

BSNT_00932___      1 ATGAATAAGGTTTTAATCGTTGATGACCATCTTGTCGTGAGGGAAGGTCT     50
                     |||.||||.||.|||||.|..|||||||||||||||||.||.||||||||
RBAM_005930__      1 ATGTATAAAGTGTTAATAGCAGATGACCATCTTGTCGTCAGAGAAGGTCT     50

BSNT_00932___     51 GAAGCTTTTAATTGAAACGAATGATCAATACACCATTATAGGAGAGGCGG    100
                     |||||||||.||.|||||.|||||.||.||||||||.|..||||||||||
RBAM_005930__     51 GAAGCTTTTGATAGAAACAAATGACCATTACACCATAACGGGAGAGGCGG    100

BSNT_00932___    101 AAAATGGAAAAGTCGCAGTCCGTCTTGCAGATGAATTAGAACCGGATATC    150
                     ||||.||.|||..|||.|||||.||.|||||.|||.||.|.||.|||.||
RBAM_005930__    101 AAAACGGGAAAACCGCCGTCCGCCTCGCAGAGGAACTAAAGCCCGATGTC    150

BSNT_00932___    151 ATTCTGATGGATTTGTATATGCCGGAGATGAGCGGGTTAGAGGCCATTAA    200
                     |||||.||||||.||||.||||||||.|||||||||.|.||.||||||||
RBAM_005930__    151 ATTCTCATGGATCTGTACATGCCGGAAATGAGCGGGCTGGAAGCCATTAA    200

BSNT_00932___    201 ACAAATAAAAGAAAAACACGATACCCCCATCATTATTTTGACTACATATA    250
                     |||.||||||||..|....|||...||.||.|||||||||||.||.||||
RBAM_005930__    201 ACAGATAAAAGAGCATTCTGATGTGCCGATTATTATTTTGACGACCTATA    250

BSNT_00932___    251 ATGAAGATCACTTAATGATCGAAGGGATTGAATTAGGAGCGAAAGGATAT    300
                     ||||||||||..|.|||||.|||||.|||||||.|||.|||||.||.|||
RBAM_005930__    251 ATGAAGATCATCTGATGATAGAAGGCATTGAATCAGGCGCGAACGGTTAT    300

BSNT_00932___    301 CTGTTAAAGGATACGAGTTCAGAAACCCTTTTTCACACAATGGATGCAGC    350
                     |||.|.||.||.||.||.|||||||||.|.|||||.||.||||||||.||
RBAM_005930__    301 CTGCTGAAAGACACAAGCTCAGAAACCTTATTTCATACGATGGATGCGGC    350

BSNT_00932___    351 GATCAGAGGAAATGTGCTGTTGCAGCCTGATATCCTCAAACGTCTGCAAG    400
                     |.||||.|||.|.|||||..|||||||.||.|||.|....|||.|.|..|
RBAM_005930__    351 GGTCAGGGGAGAAGTGCTTCTGCAGCCGGACATCTTGCGGCGTTTCCGGG    400

BSNT_00932___    401 AAATCCAATTTGAGCGGATGAAAAAGCAGCGCAGTGAGACGCAGCTGACG    450
                     ||||..||.|.||.|||  |.|||.||    ||.|||.||.|||||||||
RBAM_005930__    401 AAATGAAAATGGAACGG--GCAAATGC----CAATGAAACACAGCTGACG    444

BSNT_00932___    451 GAAAAGGAAGTCATTGTTCTAAAAGCAATTGCTAAAGGTCTTAAAAGCAA    500
                     ||.||||||.||||.||||||.||||..||||..||||.|.|||||||||
RBAM_005930__    445 GACAAGGAAATCATAGTTCTAGAAGCCGTTGCGCAAGGACATAAAAGCAA    494

BSNT_00932___    501 AGCGATTGCCTTTGATTT-GGACGTCTCTGAGCGAACAGTAAAGTCCAGA    549
                     ||||||.|||||.||||| ||| .||||.|||||.||.|||||..|.|||
RBAM_005930__    495 AGCGATCGCCTTCGATTTAGGA-ATCTCAGAGCGGACGGTAAAAGCGAGA    543

BSNT_00932___    550 TTAACGTCCATTTACAATAAATTAGGCGCGAATTCAAGAACTGAGGCAGT    599
                     |||||.||.|||||.||.|||||||||||..||||..|.||.||.||.||
RBAM_005930__    544 TTAACATCGATTTATAACAAATTAGGCGCTGATTCGCGGACGGAAGCCGT    593

BSNT_00932___    600 AACGATTGCCATGCAAAAAGGTATTCTGA----CAATAGACAACTAA    642
                     .||.|||||||||||||||||.|||||||    .||||.|.||    
RBAM_005930__    594 CACCATTGCCATGCAAAAAGGCATTCTGAAACTGAATATATAA----    636


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