Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00931 and RBAM_005920
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:37
# Commandline: needle
# -asequence pep-align/BSNT_00931___ydfH.1.9828.seq
# -bsequence pep-align/RBAM_005920___ydfH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00931___ydfH-RBAM_005920___ydfH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00931___ydfH-RBAM_005920___ydfH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00931___ydfH
# 2: RBAM_005920___ydfH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 406
# Identity: 260/406 (64.0%)
# Similarity: 319/406 (78.6%)
# Gaps: 20/406 ( 4.9%)
# Score: 1369.0
#
#
#=======================================
BSNT_00931___ 1 -------------------MLALRVPGLAFILMIYIASIVLQFVSGGWSI 31
||||||||||||||:|.||:.||::...|::
RBAM_005920__ 1 MFGTKHQEDYVSRDRRSLHMLALRVPGLAFILMVYAASVSLQYIYESWTV 50
BSNT_00931___ 32 LLLYAFTILIAIFALLHWHSYRWVKKRVILYFVVQGLITFALANLMTGFF 81
.||..|||||.||.:|||||:|||||:..|||::||.|.:..||||||.:
RBAM_005920__ 51 FLLLLFTILIVIFTVLHWHSHRWVKKKTFLYFIIQGFIIYTSANLMTGGY 100
BSNT_00931___ 82 ILVIIGLYAFLIGQILGMADRRRTFLILYLLLLLVINSAYHLHKGEVLHF 131
|.|::||||||||||:||||:.:|.|||||.:|:.|.:.:..|...:|.|
RBAM_005920__ 101 IAVVVGLYAFLIGQIIGMADKGKTLLILYLFILMSITALHEEHPHHLLRF 150
BSNT_00931___ 132 IVIAGPIMIVIITYAATFFAQVDEKIKAQLTLERLELAHQQVEQLTLQNE 181
||||.||||||||||||||||||||||.|:|||:|||||:||:|||||||
RBAM_005920__ 151 IVIAAPIMIVIITYAATFFAQVDEKIKTQMTLEKLELAHRQVKQLTLQNE 200
BSNT_00931___ 182 RQRMARDLHDTLAQGLVSLNMQLDAIHVHLAKGNTERAKEIIQQSMKRVK 231
|||||||||||||||||||:|||:|:||||:||||:|||:||.|||.|||
RBAM_005920__ 201 RQRMARDLHDTLAQGLVSLHMQLEAVHVHLSKGNTDRAKDIISQSMDRVK 250
BSNT_00931___ 232 STLADARSAIDDLRRKSEEIGVLKERITSLMDHFIESTGMACLLDYRLHQ 281
.||||||||||:||..|||||.|||.||..::||.|::|::|.|||.:|.
RBAM_005920__ 251 GTLADARSAIDNLRSTSEEIGFLKESITEQINHFTEASGLSCFLDYSVHH 300
BSNT_00931___ 282 VLDVRTAENCYYIIGECMTNAAKHAEAKTIWISIWDDEKGRLHLTVKDNG 331
||||.|||||:|:|||.:||||||||||.:|:|: .:|:|::.:||||:|
RBAM_005920__ 301 VLDVHTAENCHYMIGEGLTNAAKHAEAKNVWVSV-QEEEGQIRITVKDDG 349
BSNT_00931___ 332 KGFNVEKGKKKRGHYGLLGIQERVRAINGQFNIKSAKLKGTQIEITVPIQ 381
|||:.....:|.||||||||||||..:||.|.|.||:..||||||.:|||
RBAM_005920__ 350 KGFDAGTEMRKSGHYGLLGIQERVNMMNGTFRITSARSAGTQIEIIIPIQ 399
BSNT_00931___ 382 GEMQDE 387
||.:..
RBAM_005920__ 400 GEAEHV 405
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