Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03909 and RBAM_005910

See DNA alignment / Visit BSNT_03909 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:11
# Commandline: needle
#    -asequence pep-align/BSNT_03909___yraG.1.9828.seq
#    -bsequence pep-align/RBAM_005910___yraG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03909___yraG-RBAM_005910___yraG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03909___yraG-RBAM_005910___yraG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03909___yraG
# 2: RBAM_005910___yraG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 81
# Identity:      62/81 (76.5%)
# Similarity:    74/81 (91.4%)
# Gaps:           0/81 ( 0.0%)
# Score: 328.0
# 
#
#=======================================

BSNT_03909___      1 MDHQTLAAHEAVDLHEIVNFKTLCIAKSKLMQGLVFDQELKDLMQKDVQQ     50
                     ||.:.|||||::||||::||||||:|||||||||||||:||.||:|||||
RBAM_005910__      1 MDKRELAAHESLDLHELINFKTLCVAKSKLMQGLVFDQDLKTLMEKDVQQ     50

BSNT_03909___     51 SIQALTELQAVYERASFQAPVPQSRPTPIIN     81
                     :.|.|.:||||||||:|||||||:|||.|||
RBAM_005910__     51 ASQDLADLQAVYERATFQAPVPQNRPTSIIN     81


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.