Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03909 and RBAM_005910

See Amino acid alignment / Visit BSNT_03909 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:11
# Commandline: needle
#    -asequence dna-align/BSNT_03909___yraG.1.9828.seq
#    -bsequence dna-align/RBAM_005910___yraG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03909___yraG-RBAM_005910___yraG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03909___yraG-RBAM_005910___yraG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03909___yraG
# 2: RBAM_005910___yraG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 253
# Identity:     194/253 (76.7%)
# Similarity:   194/253 (76.7%)
# Gaps:          14/253 ( 5.5%)
# Score: 726.0
# 
#
#=======================================

BSNT_03909___      1 ATGGATCATCAAAC----ATTAGCAGCTCACGAG--GCTGTAGACTTACA     44
                     ||||||    ||.|    ||||||.|||||||||  ||||  ||||||||
RBAM_005910__      1 ATGGAT----AAGCGTGAATTAGCGGCTCACGAGTCGCTG--GACTTACA     44

BSNT_03909___     45 TGAAATTGTGAACTTTAAAACACTTTGTATAGCGAAATCAAAGTTAATGC     94
                     ||||.|..|.||||||||.||.||||||.|.||||||||.|||.|.||||
RBAM_005910__     45 TGAACTGATTAACTTTAAGACGCTTTGTGTCGCGAAATCCAAGCTCATGC     94

BSNT_03909___     95 AAGGGCTTGTGTTTGACCAAGAACTGAAGGAC-TTGATGCAAAAAGATGT    143
                     ||||||||||||||||.||.||.||||| .|| ||.|||.|||||||.||
RBAM_005910__     95 AAGGGCTTGTGTTTGATCAGGATCTGAA-AACGTTAATGGAAAAAGACGT    143

BSNT_03909___    144 GCAGCAATCCATTCAAGCCCTCACTGAATTACAAGCGGTTTATGAGCGTG    193
                     .||||||.||..|||||.|||..||||..|.||.|||||||||||.||.|
RBAM_005910__    144 TCAGCAAGCCTCTCAAGACCTGGCTGATCTGCAGGCGGTTTATGAACGGG    193

BSNT_03909___    194 CCTCATTTCAGGCCCCTGTCCCTCAAAGCCGCCCAACGCCAATCATCAAT    243
                     |..|.||||||||.||.||.|||||||.|||.||.||..|.|||||||||
RBAM_005910__    194 CAACGTTTCAGGCTCCCGTTCCTCAAAACCGGCCGACTTCGATCATCAAT    243

BSNT_03909___    244 TGA    246
                     |||
RBAM_005910__    244 TGA    246


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