Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03910 and RBAM_005900

See DNA alignment / Visit BSNT_03910 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:11
# Commandline: needle
#    -asequence pep-align/BSNT_03910___yraF.1.9828.seq
#    -bsequence pep-align/RBAM_005900___yraF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03910___yraF-RBAM_005900___yraF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03910___yraF-RBAM_005900___yraF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03910___yraF
# 2: RBAM_005900___yraF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 122
# Identity:     111/122 (91.0%)
# Similarity:   119/122 (97.5%)
# Gaps:           0/122 ( 0.0%)
# Score: 585.0
# 
#
#=======================================

BSNT_03910___      1 MNNDHLDPINSLNVPELADTTFAMDFLIRAKEGVRNTAVALTETASPDVR     50
                     ||:|||||||||:||||||.||||||||||||||||||||||||||||||
RBAM_005900__      1 MNHDHLDPINSLHVPELADMTFAMDFLIRAKEGVRNTAVALTETASPDVR     50

BSNT_03910___     51 ALLRKQLMQGIAMHQEITELMISKKWFHPYELSEQYKLDQLSAKNTIMVG    100
                     |||||||||||.||||||:||:|||||||::|||||||||||||||:|||
RBAM_005900__     51 ALLRKQLMQGITMHQEITDLMVSKKWFHPHDLSEQYKLDQLSAKNTLMVG    100

BSNT_03910___    101 NMNLFPDETNRKGMFDRTPDEH    122
                     :|||||.|||||||||||||||
RBAM_005900__    101 SMNLFPVETNRKGMFDRTPDEH    122


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