Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03910 and RBAM_005900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:11
# Commandline: needle
# -asequence dna-align/BSNT_03910___yraF.1.9828.seq
# -bsequence dna-align/RBAM_005900___yraF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03910___yraF-RBAM_005900___yraF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03910___yraF-RBAM_005900___yraF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03910___yraF
# 2: RBAM_005900___yraF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 369
# Identity: 305/369 (82.7%)
# Similarity: 305/369 (82.7%)
# Gaps: 0/369 ( 0.0%)
# Score: 1269.0
#
#
#=======================================
BSNT_03910___ 1 TTGAATAATGATCATTTAGACCCCATTAATTCGCTGAATGTGCCTGAACT 50
||||||.||||.||||||||.||.||.|||||..|..||||.||||||||
RBAM_005900__ 1 TTGAATCATGACCATTTAGATCCGATCAATTCATTACATGTCCCTGAACT 50
BSNT_03910___ 51 TGCAGACACTACATTCGCGATGGATTTTCTTATACGAGCTAAGGAAGGCG 100
|||.||.|..||||||||.|||||||||||.|||||.||.||.|||||||
RBAM_005900__ 51 TGCGGATATGACATTCGCAATGGATTTTCTCATACGCGCCAAAGAAGGCG 100
BSNT_03910___ 101 TAAGGAATACTGCTGTAGCTTTGACAGAAACCGCTTCACCAGATGTAAGA 150
|.||.|||||.||.||.|||||.|||||||||||||||||.|||||||||
RBAM_005900__ 101 TCAGAAATACCGCCGTTGCTTTAACAGAAACCGCTTCACCTGATGTAAGA 150
BSNT_03910___ 151 GCCTTGCTGCGGAAACAGCTGATGCAAGGAATTGCGATGCACCAAGAGAT 200
||.||||||||.||||||||.|||||.|||||..|||||||.||.|||||
RBAM_005900__ 151 GCTTTGCTGCGCAAACAGCTCATGCAGGGAATCACGATGCATCAGGAGAT 200
BSNT_03910___ 201 TACGGAACTGATGATCAGCAAAAAATGGTTCCATCCATATGAGCTGAGCG 250
.||.||..|||||.||||||||||.|||||.||.||..||||.|||||||
RBAM_005900__ 201 AACAGACTTGATGGTCAGCAAAAAGTGGTTTCACCCGCATGATCTGAGCG 250
BSNT_03910___ 251 AACAGTATAAGCTGGACCAGCTCTCTGCAAAAAACACGATCATGGTCGGC 300
||||||||||..||||.|||||||||||.|||||.||..||||||||||.
RBAM_005900__ 251 AACAGTATAAATTGGATCAGCTCTCTGCGAAAAATACCCTCATGGTCGGA 300
BSNT_03910___ 301 AATATGAACCTCTTTCCTGATGAAACAAATCGTAAAGGGATGTTTGACCG 350
|..||||||||.|||||.|.||||||.||..|.|||||||||||||||||
RBAM_005900__ 301 AGCATGAACCTGTTTCCCGTTGAAACGAACAGAAAAGGGATGTTTGACCG 350
BSNT_03910___ 351 GACACCTGATGAACACTAA 369
.||||||||||||||.|||
RBAM_005900__ 351 CACACCTGATGAACATTAA 369
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