Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03911 and RBAM_005890
See
DNA alignment /
Visit
BSNT_03911 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:11
# Commandline: needle
# -asequence pep-align/BSNT_03911___adhB.1.9828.seq
# -bsequence pep-align/RBAM_005890___adhB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03911___adhB-RBAM_005890___adhB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03911___adhB-RBAM_005890___adhB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03911___adhB
# 2: RBAM_005890___adhB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 378
# Identity: 350/378 (92.6%)
# Similarity: 366/378 (96.8%)
# Gaps: 0/378 ( 0.0%)
# Score: 1887.0
#
#
#=======================================
BSNT_03911___ 1 MKAVTYQGIKNVVVKDVPDPKIEKSDDMIIKVTSTAICGSDLHLIHGFIP 50
||||||||:|||||||||||||||.||||||||||||||||||||||.||
RBAM_005890__ 1 MKAVTYQGVKNVVVKDVPDPKIEKHDDMIIKVTSTAICGSDLHLIHGLIP 50
BSNT_03911___ 51 NMQEDYVIGHEPMGIVEEVGSGVTKLKKGDRVIIPFNIACGECFFCKNQL 100
|:||||:|||||||||||.|.||||:|||||||||||||||||.:|||.|
RBAM_005890__ 51 NLQEDYIIGHEPMGIVEETGPGVTKVKKGDRVIIPFNIACGECVYCKNHL 100
BSNT_03911___ 101 ESQCDQSNDNGEMGAYFGYSGQTGGYPGGQAEYLRVPFANFTHFKIPESC 150
||||||||:||::||||||||..||||||||||||||||||||||:||:|
RBAM_005890__ 101 ESQCDQSNENGDIGAYFGYSGNAGGYPGGQAEYLRVPFANFTHFKVPETC 150
BSNT_03911___ 151 EEPDEKLSVIADAMTTGFWSVDNAGVKKGDTVIVLGCGPVGLFAQKFCWL 200
|||||||||||||||||||||||||||:||||||||||||||||||||||
RBAM_005890__ 151 EEPDEKLSVIADAMTTGFWSVDNAGVKEGDTVIVLGCGPVGLFAQKFCWL 200
BSNT_03911___ 201 KGAKRVIAVDYVNYRLQHAKRTNKVEIVNFEDHENTGSYLKEITKGGADV 250
||||||||||||.|||||||||||||||||||||||||||||||||||||
RBAM_005890__ 201 KGAKRVIAVDYVYYRLQHAKRTNKVEIVNFEDHENTGSYLKEITKGGADV 250
BSNT_03911___ 251 VIDAVGMDGKMSDLEFLASGLKLHGGTMSALVIASQAVRKGGTIQITGVY 300
|||||||||||:|||||||||||.||.|||||||||||||||||||||||
RBAM_005890__ 251 VIDAVGMDGKMTDLEFLASGLKLQGGAMSALVIASQAVRKGGTIQITGVY 300
BSNT_03911___ 301 GGRYNGFPLGDIMQRNVNIRSGQAPVIHYMPYMFELVSTGKIDPGDVVSH 350
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_005890__ 301 GGRYNGFPLGDIMQRNVNIRSGQAPVIHYMPYMFELVSTGKIDPGDVVSH 350
BSNT_03911___ 351 VLPLSEAKHGYDIFDSKMDDCIKVVLKP 378
|:|||||||||::||:|.||||||||||
RBAM_005890__ 351 VIPLSEAKHGYEMFDTKTDDCIKVVLKP 378
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.