Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03911 and RBAM_005890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:11
# Commandline: needle
# -asequence dna-align/BSNT_03911___adhB.1.9828.seq
# -bsequence dna-align/RBAM_005890___adhB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03911___adhB-RBAM_005890___adhB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03911___adhB-RBAM_005890___adhB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03911___adhB
# 2: RBAM_005890___adhB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1140
# Identity: 947/1140 (83.1%)
# Similarity: 947/1140 (83.1%)
# Gaps: 6/1140 ( 0.5%)
# Score: 3946.0
#
#
#=======================================
BSNT_03911___ 1 ATGAAGGCAGTAACGTATCAAGGCATTAAAAATGTTGTTGTCAAAGATGT 50
||||||||.|||||.||||||||..|.|||||.||.|||||.|||||.||
RBAM_005890__ 1 ATGAAGGCCGTAACATATCAAGGAGTGAAAAACGTCGTTGTGAAAGACGT 50
BSNT_03911___ 51 CCCCGATCCAAAGATTGAAAAATCCGATGACATGATTATAAAGGTCACCA 100
.||.|||||.||||||||||||..||||||||||||||||||.|||||.|
RBAM_005890__ 51 GCCTGATCCGAAGATTGAAAAACACGATGACATGATTATAAAAGTCACAA 100
BSNT_03911___ 101 GTACAGCCATTTGCGGATCAGATTTACATTTAATCCATGGATTCATTCCT 150
||||.||.|||||||||||||||||||||||||||||.|||.||||.||.
RBAM_005890__ 101 GTACGGCAATTTGCGGATCAGATTTACATTTAATCCACGGACTCATCCCG 150
BSNT_03911___ 151 AATATGCAAGAAGACTATGTCATCGGCCATGAACCGATGGGAATCGTCGA 200
|||.||||.||||||||..||||||||||||||||||||||.|||||.||
RBAM_005890__ 151 AATTTGCAGGAAGACTACATCATCGGCCATGAACCGATGGGCATCGTGGA 200
BSNT_03911___ 201 AGAAGTTGGTTCTGGTGTGACTAAACT-AAAAAAGGGAGATCGGGTAATT 249
||||...|||.|.||.|||||.|||.| ||||||||| ||.||.||.|||
RBAM_005890__ 201 AGAAACCGGTCCCGGCGTGACGAAAGTCAAAAAAGGG-GACCGCGTCATT 249
BSNT_03911___ 250 ATTCCCTTTAATATAGCATGCGGGGAATGCTTTTTTTGTAAAAACCAGCT 299
|||||.||||||||.||.|||||.||||||.|||.|||||||||.||.||
RBAM_005890__ 250 ATTCCTTTTAATATCGCCTGCGGAGAATGCGTTTATTGTAAAAATCACCT 299
BSNT_03911___ 300 GGAAAGCCAATGCGATCAGTCTAATGACAATGGGGAAATGGGCGCTTATT 349
||||||||||||.|||||.||.|||||.||.||.||.||.||||||||||
RBAM_005890__ 300 GGAAAGCCAATGTGATCAATCAAATGAGAACGGCGATATAGGCGCTTATT 349
BSNT_03911___ 350 TCGGCTATTCAGGGCAAA--CAGGCGGTTATCCAGGCGGGCAAGCTGAAT 397
||||||||||||| ||| |.|||||.|||||.||.||.||.||.||.|
RBAM_005890__ 350 TCGGCTATTCAGG--AAATGCCGGCGGCTATCCGGGAGGCCAGGCGGAGT 397
BSNT_03911___ 398 ATTTAAGAGTGCCGTTTGCGAATTTTACCCATTTTAAAATCCCTGAATCT 447
||||..|.||.||.||||||||.|||||.|||||||||.|.||.|||.|.
RBAM_005890__ 398 ATTTGCGCGTTCCATTTGCGAACTTTACTCATTTTAAAGTTCCCGAAACA 447
BSNT_03911___ 448 TGTGAGGAACCCGATGAGAAATTAAGCGTGATTGCCGATGCCATGACCAC 497
||.||.|||||.|||||||||.|.||.||.|||||||||||.|||||.||
RBAM_005890__ 448 TGCGAAGAACCGGATGAGAAACTGAGTGTTATTGCCGATGCGATGACAAC 497
BSNT_03911___ 498 CGGCTTTTGGAGTGTGGATAATGCCGGCGTAAAAAAAGGCGATACAGTTA 547
||||||||||||.||.||.|||||||||||||||.|||||||||||||||
RBAM_005890__ 498 CGGCTTTTGGAGCGTTGACAATGCCGGCGTAAAAGAAGGCGATACAGTTA 547
BSNT_03911___ 548 TCGTTCTCGGCTGCGGGCCAGTCGGCCTGTTTGCGCAAAAATTTTGCTGG 597
|||||||||||||||||||.||.|||||.||.||.||||||||.||||||
RBAM_005890__ 548 TCGTTCTCGGCTGCGGGCCCGTGGGCCTTTTCGCTCAAAAATTCTGCTGG 597
BSNT_03911___ 598 CTAAAGGGCGCAAAACGCGTCATAGCAGTTGACTATGTAAACTATCGCTT 647
.|||||||.||.||||||||.|||||.||.||||||||..||||.||..|
RBAM_005890__ 598 TTAAAGGGAGCGAAACGCGTAATAGCCGTAGACTATGTCTACTACCGTCT 647
BSNT_03911___ 648 ACAGCATGCGAAACGCACAAACAAAGTAGAAATCGTAAACTTTGAAGACC 697
.||||||||||||||.||.||.|||||.||||||||.|||||.|||||||
RBAM_005890__ 648 CCAGCATGCGAAACGGACGAATAAAGTGGAAATCGTGAACTTCGAAGACC 697
BSNT_03911___ 698 ATGAGAATACAGGAAGTTATTTAAAGGAAATCACGAAAGGCGGAGCGGAT 747
|.||.|||||.||.||.||..|.||||||||.||.||||||||.||.||.
RBAM_005890__ 698 ACGAAAATACGGGCAGCTACCTGAAGGAAATAACCAAAGGCGGCGCCGAC 747
BSNT_03911___ 748 GTAGTCATTGACGCTGTTGGGATGGATGGTAAAATGAGCGATCTCGAGTT 797
||.|||||||||||.||.||.|||||.||.|||||||..||.||.|||||
RBAM_005890__ 748 GTGGTCATTGACGCCGTCGGCATGGACGGGAAAATGACAGACCTTGAGTT 797
BSNT_03911___ 798 CCTTGCCAGCGGATTAAAGCTTCATGGCGGAACGATGAGTGCATTGGTCA 847
|||.||||||||||||||.|||||.||||||.|||||||.||.||.||||
RBAM_005890__ 798 CCTCGCCAGCGGATTAAAACTTCAAGGCGGAGCGATGAGCGCTTTAGTCA 847
BSNT_03911___ 848 TTGCCTCCCAAGCTGTTCGCAAAGGAGGAACCATACAAATTACAGGTGTG 897
|||||||||||||.||.||||||||.|||||.||.||.|||||.||||||
RBAM_005890__ 848 TTGCCTCCCAAGCGGTGCGCAAAGGCGGAACGATCCAGATTACGGGTGTG 897
BSNT_03911___ 898 TATGGAGGCAGATATAACGGTTTTCCGTTAGGAGATATTATGCAGCGAAA 947
|||||.||.|||||||||||||||||..|.||.|||||.|||||||||||
RBAM_005890__ 898 TATGGCGGGAGATATAACGGTTTTCCTCTTGGCGATATCATGCAGCGAAA 947
BSNT_03911___ 948 CGTCAATATACGCTCTGGACAGGCTCCTGTGATTCACTATATGCCGTACA 997
|||||||||.||.||.|||||.|||||.||.||.||.|||||||||||.|
RBAM_005890__ 948 CGTCAATATCCGATCAGGACAAGCTCCGGTTATCCATTATATGCCGTATA 997
BSNT_03911___ 998 TGTTTGAACTCGTATCAACGGGCAAAATTGATCCGGGAGATGTTGTCAGC 1047
||||||||||.||.|||||.|||||||||||||||||.||||||||.|||
RBAM_005890__ 998 TGTTTGAACTGGTGTCAACCGGCAAAATTGATCCGGGCGATGTTGTAAGC 1047
BSNT_03911___ 1048 CATGTCCTGCCGCTTAGTGAAGCCAAGCATGGCTATGACATTTTTGATTC 1097
||||||.|.||||||||||||||.|||||.||||||||.||.|||||..|
RBAM_005890__ 1048 CATGTCATTCCGCTTAGTGAAGCGAAGCACGGCTATGAGATGTTTGACAC 1097
BSNT_03911___ 1098 AAAAATGGATGATTGTATCAAAGTTGTGTTAAAGCCTTAA 1137
.||||..||||||||.||.||||||||..|.||.||||||
RBAM_005890__ 1098 GAAAACAGATGATTGCATAAAAGTTGTACTCAAACCTTAA 1137
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