Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00908 and RBAM_005860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:37
# Commandline: needle
# -asequence pep-align/BSNT_00908___ydeL.1.9828.seq
# -bsequence pep-align/RBAM_005860___ydeL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00908___ydeL-RBAM_005860___ydeL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00908___ydeL-RBAM_005860___ydeL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00908___ydeL
# 2: RBAM_005860___ydeL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 465
# Identity: 372/465 (80.0%)
# Similarity: 426/465 (91.6%)
# Gaps: 3/465 ( 0.6%)
# Score: 1999.0
#
#
#=======================================
BSNT_00908___ 1 MQMDITPFLNRNLDSPLYQQLYRYFKENMHRGRIQKGMKLPSKRLLANQL 50
|||||||||:||.||||||||:||||||:|||.||:||||||||::||
RBAM_005860__ 1 --MDITPFLNRDLDIPLYQQLYRHFKENMHQGRIPKGLKLPSKRLLSSQL 48
BSNT_00908___ 51 SISQTTVERAYEQLAAEGYIVSKPRSGWFADYHDSDFANDRMPSTTPIQQ 100
|||||||||||||||||||||||||||||||| |||....:.|..:|:|.
RBAM_005860__ 49 SISQTTVERAYEQLAAEGYIVSKPRSGWFADY-DSDAVYVKKPGASPVQT 97
BSNT_00908___ 101 EAEENKQWIDFHYGNVDSSYFPFSAWRKSMVNSLDQYGHELYRPGHVLGE 150
:|:|::||||||||.||:::|||||||||||.|||||||||||.|..|||
RBAM_005860__ 98 KAKEDRQWIDFHYGTVDAAHFPFSAWRKSMVASLDQYGHELYRSGDDLGE 147
BSNT_00908___ 151 FELRTLIAEYLYQSRGVHCGPEQVIIGAGNPILLQILCQVFEPNISIGYE 200
.||||||:|||||||||:|.|||||:|||||.|||:||::||.|:|||||
RBAM_005860__ 148 LELRTLISEYLYQSRGVNCRPEQVIVGAGNPALLQMLCKIFESNLSIGYE 197
BSNT_00908___ 201 DPGYPRARKIFEANRMNIVPIPVDEEGICIQKVKEQQPNLVYVTPSHQFT 250
||||||||:||:||.|.|:|||||:||:||:|:.|::|.|||||||||||
RBAM_005860__ 198 DPGYPRAREIFKANHMKIIPIPVDDEGVCIRKLNEERPRLVYVTPSHQFT 247
BSNT_00908___ 251 LGTIMTINRRIQLLKWAAENQSFIIEDDYDGEFRYTGQPVPSLQGLDQHN 300
|||||.:||||||||||.|:|||||||||||||||||||:|||||||||:
RBAM_005860__ 248 LGTIMPVNRRIQLLKWAKEHQSFIIEDDYDGEFRYTGQPIPSLQGLDQHH 297
BSNT_00908___ 301 RVIYMGTFSKSLLPSLRISYMILPSPLLKKGHDITSLYKQTVSCHSQLTL 350
|||||||||:||||||||||||||.||::||.:|.|||||||||||||||
RBAM_005860__ 298 RVIYMGTFSQSLLPSLRISYMILPLPLIEKGREIASLYKQTVSCHSQLTL 347
BSNT_00908___ 351 AEFIKNGEWQKHINRMRKLYRKKRAIVLEAVQRELGEHVRIRGENSGLRI 400
|:|||:|||||||||||||||||||::||||:||||::||||||||||||
RBAM_005860__ 348 AQFIKSGEWQKHINRMRKLYRKKRAVLLEAVRRELGQYVRIRGENSGLRI 397
BSNT_00908___ 401 LLDVYLPFGEKELIEKAKKHGVKIYPVSLSYQHHPPTKTVSLGFAGVSES 450
||||.|||.||||||||::.|||||||||:||...|.||||||||||||:
RBAM_005860__ 398 LLDVQLPFSEKELIEKAEEQGVKIYPVSLTYQKQVPEKTVSLGFAGVSET 447
BSNT_00908___ 451 DIREGIKKLKAAWKI 465
||:||||||:|||.:
RBAM_005860__ 448 DIQEGIKKLRAAWAL 462
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