Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04729 and RBAM_005780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:17
# Commandline: needle
# -asequence pep-align/BSNT_04729___paiB.1.9828.seq
# -bsequence pep-align/RBAM_005780.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04729___paiB-RBAM_005780.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04729___paiB-RBAM_005780.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04729___paiB
# 2: RBAM_005780
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 211
# Identity: 83/211 (39.3%)
# Similarity: 129/211 (61.1%)
# Gaps: 9/211 ( 4.3%)
# Score: 405.5
#
#
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BSNT_04729___ 1 MYIPKYFKVTNAEEIWNFVQENSFGTVVTTEQGKPIATHLPLGFNKKDDH 50
||||..|:::.||.. :.::|..|..:.:|.:|||.||||||..:|.::.
RBAM_005780 1 MYIPAPFQLSEAEAC-DVIKEYGFAALFSTAEGKPYATHLPLMMSKNNEC 49
BSNT_04729___ 51 YYITGHFAYGNPQWRTFEACEDVLVMFQGPHAYISSSWY-SRENVPTWNY 99
.| ||||..||||:..:. ::||.:|||||.|||..|| :.:.||||||
RBAM_005780 50 LY--GHFALPNPQWKEIDG-QNVLAVFQGPHCYISPKWYETNQAVPTWNY 96
BSNT_04729___ 100 QAVHMYGKASMLEKDELAEELTIMLEKYEKHRDNPVLWDKLSPKLLEREL 149
.|||:||:|.:|:::|..:.::.::.|||. .|:|...:.:..|||....
RBAM_005780 97 VAVHVYGEAELLDEEETVQSMSDLVLKYES-PDSPYKLEDVDAKLLAGMN 145
BSNT_04729___ 150 KGIVGFKIKVEDIQAAYKLSQNRNETDYMNIIEQLQNEENPNAKQMAELM 199
||:.|||||:..|:...|||||.:......:::||:...:.|.:.::.||
RBAM_005780 146 KGVKGFKIKISKIEGKAKLSQNHSAARQGLVVQQLKQIPHTNEQLISGLM 195
BSNT_04729___ 200 ENKFKKQI--- 207
|...|:..
RBAM_005780 196 EENIKRITANN 206
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