Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03874 and RBAM_005600

See DNA alignment / Visit BSNT_03874 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:10
# Commandline: needle
#    -asequence pep-align/BSNT_03874___czcD.1.9828.seq
#    -bsequence pep-align/RBAM_005600___czcD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03874___czcD-RBAM_005600___czcD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03874___czcD-RBAM_005600___czcD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03874___czcD
# 2: RBAM_005600___czcD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 313
# Identity:     277/313 (88.5%)
# Similarity:   294/313 (93.9%)
# Gaps:           2/313 ( 0.6%)
# Score: 1414.5
# 
#
#=======================================

BSNT_03874___      1 MGHNHNE--GANKKVLLISFIMITGYMIIEAIGGFLTNSLALLSDAGHML     48
                     ||||||.  |:|||||||||||||||||||||||||||||||||||||||
RBAM_005600__      1 MGHNHNHAGGSNKKVLLISFIMITGYMIIEAIGGFLTNSLALLSDAGHML     50

BSNT_03874___     49 SDSISLMVALIAFTLAEKKANHNKTFGYKRFEILAAVINGAALILISLYI     98
                     |||||||||||||.||||||:|:|||||||||||||||||.|||||||||
RBAM_005600__     51 SDSISLMVALIAFKLAEKKASHHKTFGYKRFEILAAVINGVALILISLYI    100

BSNT_03874___     99 IYEAIERFSNPPKVATTGMLTISIIGLVVNLLVAWIMMSGGDTKNNLNIR    148
                     |||||:|||:||:||||||||||||||.||:||||||::|||||||||||
RBAM_005600__    101 IYEAIKRFSHPPEVATTGMLTISIIGLAVNILVAWIMLNGGDTKNNLNIR    150

BSNT_03874___    149 GAYLHVISDMLGSVGAILAAILIIFFGWGWADPLASIIVAILVLRSGYNV    198
                     |||||||||||||:||||||||||||||.||||.||:|||||||||||:|
RBAM_005600__    151 GAYLHVISDMLGSIGAILAAILIIFFGWSWADPAASVIVAILVLRSGYHV    200

BSNT_03874___    199 TKDSIHILMEGTPENIDVYDIIRTIEGTEGIQNIHDLHIWSITSGLNALS    248
                     ||||||:||||||.||||.|||.|||.|||||:|||||||||||||||||
RBAM_005600__    201 TKDSIHVLMEGTPGNIDVTDIIHTIEETEGIQSIHDLHIWSITSGLNALS    250

BSNT_03874___    249 CHAVVDDQLTISESENILRKIEHELEHKGITHVTIQMETEAHNHDNAILC    298
                     |||||:|||||||||:|||||||||..||||||||||||.||||||.|||
RBAM_005600__    251 CHAVVNDQLTISESESILRKIEHELGDKGITHVTIQMETAAHNHDNTILC    300

BSNT_03874___    299 QPKMEKPRDHHHH    311
                     |.:.|.|||||||
RBAM_005600__    301 QSQTENPRDHHHH    313


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