Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03874 and RBAM_005600
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:10
# Commandline: needle
# -asequence dna-align/BSNT_03874___czcD.1.9828.seq
# -bsequence dna-align/RBAM_005600___czcD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03874___czcD-RBAM_005600___czcD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03874___czcD-RBAM_005600___czcD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03874___czcD
# 2: RBAM_005600___czcD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 944
# Identity: 832/944 (88.1%)
# Similarity: 832/944 (88.1%)
# Gaps: 10/944 ( 1.1%)
# Score: 3699.5
#
#
#=======================================
BSNT_03874___ 1 ATGGGTCACAATCATAA------TGAAGGAGCAAATAAAAAGGTTTTATT 44
||||||||||||||.|| ||..|||.|.|||||.|||||||||||
RBAM_005600__ 1 ATGGGTCACAATCACAATCACGCTGGCGGATCCAATAAGAAGGTTTTATT 50
BSNT_03874___ 45 GATCTCTTTTATCATGATTACAGGTTATATGATAATAGAAGCTATAGGTG 94
||||||||||||||||||||||||||||||||||||||||||.|||||.|
RBAM_005600__ 51 GATCTCTTTTATCATGATTACAGGTTATATGATAATAGAAGCGATAGGCG 100
BSNT_03874___ 95 GATTTTTAACAAATAGTCTGGCGCTTTTATCTGATGCAGGCCATATGCTG 144
||||||||||.||||||.|.||||||||.||.||||||||||||||||||
RBAM_005600__ 101 GATTTTTAACCAATAGTTTAGCGCTTTTGTCAGATGCAGGCCATATGCTG 150
BSNT_03874___ 145 AGTGATTCAATTTCATTAATGGTTGCCCTGATTGCTTTTACATTAGCTGA 194
|||||.||.||.||||||||||||||.|||||||||||||.|||.||.||
RBAM_005600__ 151 AGTGACTCGATCTCATTAATGGTTGCTCTGATTGCTTTTAAATTGGCCGA 200
BSNT_03874___ 195 AAAAAAGGCAAATCACAATAAGACATTCGGCTATAAACGATTTGAGATTC 244
|||||||||||.|||..||||.|||||||||||.||||||||||||||||
RBAM_005600__ 201 AAAAAAGGCAAGTCATCATAAAACATTCGGCTACAAACGATTTGAGATTC 250
BSNT_03874___ 245 TTGCAGCTGTGATAAACGGTGCTGCCTTAATTCTTATTTCTCTTTATATC 294
|.|||||||||||||||||||.|||.|||||..|.|||||||||||.|||
RBAM_005600__ 251 TCGCAGCTGTGATAAACGGTGTTGCATTAATATTGATTTCTCTTTACATC 300
BSNT_03874___ 295 ATTTATGAAGCAATCGAACGCTTCTCTAATCCACCAAAAGTAGCAACAAC 344
|||||||||||||||.||||.||||||.||||.||..|.|||||||||||
RBAM_005600__ 301 ATTTATGAAGCAATCAAACGTTTCTCTCATCCGCCGGAGGTAGCAACAAC 350
BSNT_03874___ 345 TGGAATGCTTACAATTAGTATCATCGGGTTAGTTGTGAATCTATTGGTCG 394
.||.|||||.||.||||||||.||||||||||.|||.|||.|||||||||
RBAM_005600__ 351 CGGCATGCTGACGATTAGTATTATCGGGTTAGCTGTAAATATATTGGTCG 400
BSNT_03874___ 395 CTTGGATTATGATGAGTGGCGGAGATACAAAGAATAATCTGAATATAAGA 444
|||||||||||.|||..||||||||||||||||||||.|||||.||||||
RBAM_005600__ 401 CTTGGATTATGCTGAACGGCGGAGATACAAAGAATAACCTGAACATAAGA 450
BSNT_03874___ 445 GGAGCTTATTTACATGTAATAAGCGATATGCTCGGCTCTGTAGGTGCCAT 494
||.|||||.||||||||.|||||.||.||||||||.|||.||||||||||
RBAM_005600__ 451 GGGGCTTACTTACATGTGATAAGTGACATGCTCGGATCTATAGGTGCCAT 500
BSNT_03874___ 495 TTTAGCTGCCATCCTCATCATCTTCTTTGGATGGGGCTGGGCAGACCCAT 544
..|.|||||.|||||.|||||||||||.||.|||.||||||||||.|||.
RBAM_005600__ 501 ACTGGCTGCGATCCTTATCATCTTCTTCGGGTGGAGCTGGGCAGATCCAG 550
BSNT_03874___ 545 TGGCTAGTATCATTGTGGCTATTCTTGTTCTAAGAAGCGGTTACAATGTG 594
.|||.|||.||||||||||||||||||||||.||||||||||||.|||||
RBAM_005600__ 551 CGGCCAGTGTCATTGTGGCTATTCTTGTTCTGAGAAGCGGTTACCATGTG 600
BSNT_03874___ 595 ACTAAAGATTCCATTCACATATTAATGGAAGGAACTCCAGAAAATATCGA 644
||.|||||.|||||||||.|||||||||||||||||||.|.|||||||||
RBAM_005600__ 601 ACGAAAGACTCCATTCACGTATTAATGGAAGGAACTCCGGGAAATATCGA 650
BSNT_03874___ 645 TGTCTATGATATCATTCGTACAATTGAAGGGACAGAGGGAATTCAAAACA 694
||||..|||.|||||||.|||||||||||.||||||.||||||||||.||
RBAM_005600__ 651 TGTCACTGACATCATTCATACAATTGAAGAGACAGAAGGAATTCAAAGCA 700
BSNT_03874___ 695 TTCATGATTTACACATATGGTCTATCACAAGCGGATTGAATGCTCTTTCT 744
||||||||||.||||||||||||||||||||||||||||||||||||||.
RBAM_005600__ 701 TTCATGATTTGCACATATGGTCTATCACAAGCGGATTGAATGCTCTTTCC 750
BSNT_03874___ 745 TGCCATGCAGTTGTTGACGATCAACTGACCATTTCAGAAAGTGAAAATAT 794
|||||.|||||||||.|||||||||||||||||||.||||||||||.|||
RBAM_005600__ 751 TGCCACGCAGTTGTTAACGATCAACTGACCATTTCTGAAAGTGAAAGTAT 800
BSNT_03874___ 795 TTTACGCAAAATTGAACATGAACTT-GAGCATAAAGGCATTACGCACGTA 843
||||||||||||||||||||||||| ||| |||||||||||||.||.|||
RBAM_005600__ 801 TTTACGCAAAATTGAACATGAACTTGGAG-ATAAAGGCATTACACATGTA 849
BSNT_03874___ 844 ACCATTCAAATGGAAACCGAAGCGCATAATCACGACAATGCGATCCTTTG 893
|||||||||||||||||.|.|||||||||||||||||||.||||.|||||
RBAM_005600__ 850 ACCATTCAAATGGAAACAGCAGCGCATAATCACGACAATACGATTCTTTG 899
BSNT_03874___ 894 TCAG-CCCAAAATGGAGAAGCCGCGTGACCACCATCACCATTAA 936
|||| ||||||.| |||||.|||||||||||.|||||.||||||
RBAM_005600__ 900 TCAGTCCCAAACT-GAGAATCCGCGTGACCATCATCATCATTAA 942
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