Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01170 and RBAM_005330
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:52
# Commandline: needle
# -asequence pep-align/BSNT_01170___yezE.1.9828.seq
# -bsequence pep-align/RBAM_005330.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01170___yezE-RBAM_005330.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01170___yezE-RBAM_005330.aln
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#
# Aligned_sequences: 2
# 1: BSNT_01170___yezE
# 2: RBAM_005330
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 63/194 (32.5%)
# Similarity: 115/194 (59.3%)
# Gaps: 3/194 ( 1.5%)
# Score: 303.5
#
#
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BSNT_01170___ 1 MGRNKEFDTALVLHRAIEVFGEYGYEGTSLQDLLSHLGIARQSLYDTYGT 50
|.||||||....|.:|:.:|.|.|||.||:|||:.|:|:.|:|:|||:|.
RBAM_005330 1 MARNKEFDEKKALRKAMILFWEQGYEKTSMQDLVDHMGVHRRSIYDTFGD 50
BSNT_01170___ 51 KRDLFLSAVKTYLEGKNTAVMERLESPGSVKEAIRNIFQEGVNALRDPER 100
|..||:..:..|:|.....:...:::..:||::||.:|:..:::.: ::
RBAM_005330 51 KHTLFMRVLNHYVEIMEGRMKNEVKTELTVKQSIRKLFEMVIDSTQ--QQ 98
BSNT_01170___ 101 AKACYIINSAIEQIPHDPELARYFDRQSKQLEDAFYQALLRAKDQGELNG 150
.|.|..:|:|:|....|.|:|:.........|...:..|...:||||: .
RBAM_005330 99 PKGCLAVNAAVELSLIDEEVAKKTTEIFINTEALLFDLLKHGQDQGEI-P 147
BSNT_01170___ 151 EDTDITALARYLNQSRLSLTFVAKVTADMDRLQNHVDVSLSVLD 194
:..||..|:::::.|.:.:..:.|.|.|.::|::.::.:||.||
RBAM_005330 148 KHNDIKGLSQFIHNSLVGIRVLTKTTNDKEKLESIINFTLSTLD 191
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