Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00802 and RBAM_005050

See DNA alignment / Visit BSNT_00802 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:35
# Commandline: needle
#    -asequence pep-align/BSNT_00802___rsbV.1.9828.seq
#    -bsequence pep-align/RBAM_005050___rsbV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00802___rsbV-RBAM_005050___rsbV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00802___rsbV-RBAM_005050___rsbV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00802___rsbV
# 2: RBAM_005050___rsbV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 109
# Identity:      88/109 (80.7%)
# Similarity:   102/109 (93.6%)
# Gaps:           0/109 ( 0.0%)
# Score: 461.0
# 
#
#=======================================

BSNT_00802___      1 MNINVDVKQNENDIQVNIAGEIDVYSAPVLREKLVPLAEQGADLRICLKD     50
                     ||:.||:|:|.:|||:|||||||||||||:||||:|||.:|.|:||||||
RBAM_005050__      1 MNLTVDMKENLSDIQINIAGEIDVYSAPVVREKLMPLANEGKDMRICLKD     50

BSNT_00802___     51 VSYMDSTGLGVFVGTFKMVKKQGGSLKLENLSERLIRLFDITGLKDIIDI    100
                     |:||||||||||||.||.|.|:||||||||||:||:|||:||||||||||
RBAM_005050__     51 VNYMDSTGLGVFVGVFKTVSKEGGSLKLENLSDRLVRLFEITGLKDIIDI    100

BSNT_00802___    101 SAKSEGGVQ    109
                     |||||||||
RBAM_005050__    101 SAKSEGGVQ    109


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