Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00801 and RBAM_005040
See
DNA alignment /
Visit
BSNT_00801 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:35
# Commandline: needle
# -asequence pep-align/BSNT_00801___rsbU.1.9828.seq
# -bsequence pep-align/RBAM_005040___rsbU.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00801___rsbU-RBAM_005040___rsbU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00801___rsbU-RBAM_005040___rsbU.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00801___rsbU
# 2: RBAM_005040___rsbU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 335
# Identity: 300/335 (89.6%)
# Similarity: 323/335 (96.4%)
# Gaps: 0/335 ( 0.0%)
# Score: 1584.0
#
#
#=======================================
BSNT_00801___ 1 MDFREVIEQRYHQLLSRYIAELTETSLYQAQKFSRKTIEHQIPPEEIISI 50
|||||||||||||||||||||||||||||||||||||||||:||||||||
RBAM_005040__ 1 MDFREVIEQRYHQLLSRYIAELTETSLYQAQKFSRKTIEHQVPPEEIISI 50
BSNT_00801___ 51 HRKVLKELYPSLPEDVFHSLDFLIEVMIGYGMAYQEHQTLRGIQQEIKSE 100
||||:|||||.|||||||||||||||||||||||||||:||.||||::||
RBAM_005040__ 51 HRKVVKELYPDLPEDVFHSLDFLIEVMIGYGMAYQEHQSLRDIQQELRSE 100
BSNT_00801___ 101 IEIAANVQQTLLGTKVPQEEALDIGAISVPAKQMSGDYYHFVKDKESINI 150
|||||||||||||||:|:||.|||||||||||||||||||||||||||||
RBAM_005040__ 101 IEIAANVQQTLLGTKIPEEEDLDIGAISVPAKQMSGDYYHFVKDKESINI 150
BSNT_00801___ 151 AIADVIGKGIPAALCMSMIKYAMDSLPETGIHPSQVLKNLNRVVEQNVDA 200
||||||||||||||||||||||||||||.||||||||||||||||||||:
RBAM_005040__ 151 AIADVIGKGIPAALCMSMIKYAMDSLPEIGIHPSQVLKNLNRVVEQNVDS 200
BSNT_00801___ 201 SMFITMFYANYNMDNHQFTYASAGHEPGFYYSQKDNTFYDLEAKGLVLGI 250
||||||||||||..||||||||||||||||||:|:..|||||||||||||
RBAM_005040__ 201 SMFITMFYANYNTKNHQFTYASAGHEPGFYYSEKEKKFYDLEAKGLVLGI 250
BSNT_00801___ 251 SQDYDYKQFDQHLEKGDMIVLFSDGVTECRTENGFLERPDLQKLIEEHMC 300
|||:||.|::||:::|||||||||||||||||||||||.|:|:::||||.
RBAM_005040__ 251 SQDFDYSQYEQHMDEGDMIVLFSDGVTECRTENGFLERSDIQRMLEEHMD 300
BSNT_00801___ 301 SSAQEMVKNIYDSLLKLQDFQLHDDFTLIVLRRKV 335
.|||:||||||||||:|||||||||||||||:|||
RBAM_005040__ 301 CSAQDMVKNIYDSLLRLQDFQLHDDFTLIVLKRKV 335
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.