Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00801 and RBAM_005040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:35
# Commandline: needle
# -asequence dna-align/BSNT_00801___rsbU.1.9828.seq
# -bsequence dna-align/RBAM_005040___rsbU.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00801___rsbU-RBAM_005040___rsbU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00801___rsbU-RBAM_005040___rsbU.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00801___rsbU
# 2: RBAM_005040___rsbU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1013
# Identity: 823/1013 (81.2%)
# Similarity: 823/1013 (81.2%)
# Gaps: 10/1013 ( 1.0%)
# Score: 3361.5
#
#
#=======================================
BSNT_00801___ 1 GTGGATTTTAGGGAGGTTATTGAGCAGCGGTATCATCAGCTGCTTAGCCG 50
||||||||.|||||||||||.|||||||||||||||||||||||||||||
RBAM_005040__ 1 GTGGATTTCAGGGAGGTTATAGAGCAGCGGTATCATCAGCTGCTTAGCCG 50
BSNT_00801___ 51 ATATATAGCCGAATTAACAGAAACATCTTTATATCAAGCCCAAAAATTCA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_005040__ 51 ATATATAGCCGAATTAACAGAAACATCTTTATATCAAGCCCAAAAATTCA 100
BSNT_00801___ 101 GCCGAAAAACAATCGAGCACCAAATTCCTCCGGAAGAAATCATCAGCATT 150
||||||||||.||.||.||.||..||||||||||.||.||.|||||.||.
RBAM_005040__ 101 GCCGAAAAACGATTGAACATCAGGTTCCTCCGGAGGAGATTATCAGTATC 150
BSNT_00801___ 151 CACAGAAAAGTGCTGAAGGAGCTGTATCCAAGTCTCCCGGAAGATGTGTT 200
|||.|||||||..|.|||||.||||||||...|||.|||||||||||.||
RBAM_005040__ 151 CACCGAAAAGTAGTAAAGGAACTGTATCCGGATCTGCCGGAAGATGTTTT 200
BSNT_00801___ 201 TCATTCGCTGGATTTTTTAATAGAAGTCATGATTGGTTATGGAATGGCTT 250
||||||||||||||||||||||||||||||||||||.||.||.|||||||
RBAM_005040__ 201 TCATTCGCTGGATTTTTTAATAGAAGTCATGATTGGCTACGGGATGGCTT 250
BSNT_00801___ 251 ATCAGGAGCATCAAACCCTTAGAGGGATACAGCAGGAAATCAAATCAGAA 300
|||||||.|||||||..||.||||..||.||||||||..|....||||||
RBAM_005040__ 251 ATCAGGAACATCAAAGTCTGAGAGATATCCAGCAGGAGCTTCGTTCAGAA 300
BSNT_00801___ 301 ATTGAAATCGCGGCAAATGTCCAGCAGACGCTGCTCGGAACTAAAGTTCC 350
||||||||.||.||||||||.||||||||||||||.||.||.|||.||||
RBAM_005040__ 301 ATTGAAATTGCCGCAAATGTTCAGCAGACGCTGCTTGGCACAAAAATTCC 350
BSNT_00801___ 351 TCAGGAGGAAGCGCTGGATATCGGCGCCATCAGTGTTCCCGCTAAACAGA 400
|.|.||.||||..|||||||||||.||.|||||.||.|||||.|||||||
RBAM_005040__ 351 TGAAGAAGAAGATCTGGATATCGGGGCGATCAGCGTCCCCGCCAAACAGA 400
BSNT_00801___ 401 TGAGCGGTGATTACTACCACTTTGTCAAAGACAAGGAATCCATCAATATT 450
|||||||.|||||.||.|||||||||||||||||||||||.||.||.||.
RBAM_005040__ 401 TGAGCGGGGATTATTATCACTTTGTCAAAGACAAGGAATCGATTAACATC 450
BSNT_00801___ 451 GCAATCGCGGACGTGATCGGAAAAGGCATTCCAGCGGCTTTATGCATGTC 500
||.||.||.||.||.|||||||||||.||.||.||.||.||.||||||||
RBAM_005040__ 451 GCGATAGCCGATGTCATCGGAAAAGGAATACCCGCCGCATTGTGCATGTC 500
BSNT_00801___ 501 CATGATTAAATACGCGATGGACTCTTTGCCAGAAACGGGCATACACCCTT 550
.|||||.||.||.||.|||||||||.|.||.||.|..|||||.|||||.|
RBAM_005040__ 501 GATGATCAAGTATGCCATGGACTCTCTTCCGGAGATCGGCATTCACCCCT 550
BSNT_00801___ 551 CTCAAGTGCTGAAAAATTTGAATCGTGTTGTTGAACAAAACGTTGATGCC 600
|.|||||||||||||||.|.||.||.|||||.|||||.|||||.||..|.
RBAM_005040__ 551 CCCAAGTGCTGAAAAATCTTAACCGCGTTGTAGAACAGAACGTGGACTCA 600
BSNT_00801___ 601 AGTATGTTTATTACGATGTTTTATGCGAATTACAATATGGACAATCATCA 650
||.||||||||.||.||||||||.||.||.|||||||.|.|.|||||.||
RBAM_005040__ 601 AGCATGTTTATCACCATGTTTTACGCAAACTACAATACGAAAAATCACCA 650
BSNT_00801___ 651 ATTTACATATGCTTCAGCGGGACATGAACCGGGATTCTATTATTCTCAAA 700
||||||||||||.||.|||||.|||||.|||||.|||||.||.|||.|||
RBAM_005040__ 651 ATTTACATATGCCTCTGCGGGGCATGAGCCGGGCTTCTACTACTCTGAAA 700
BSNT_00801___ 701 AGGACAACACGTTTTACGATTTAGAGGCCAAAGGACTCGTTCTCGGCATC 750
|.||.||.|.||||||.|||.|.|||||.||||||.|.||.||.||.||.
RBAM_005040__ 701 AAGAAAAAAAGTTTTATGATCTGGAGGCAAAAGGATTGGTGCTGGGAATT 750
BSNT_00801___ 751 TCGCAGGACTATGACTACAAACAATTCGATCAGCATCTGGAAAAGGGCGA 800
||.|||||.|.|||.||||..||||..||.|||||..||||..|.||.||
RBAM_005040__ 751 TCTCAGGATTTTGATTACAGCCAATATGAACAGCACATGGACGAAGGAGA 800
BSNT_00801___ 801 TATGATTGTTTTATTTTCTGATGGCGTCACAGAATGCAGAACGGAAAACG 850
.|||||.|||.|.||||||||.||||||||.||||||.|.||.|||||||
RBAM_005040__ 801 CATGATCGTTCTTTTTTCTGACGGCGTCACCGAATGCCGTACCGAAAACG 850
BSNT_00801___ 851 GTTTCTT-----GGAGCGTCCTGATCTGCAGAAGCTCATTGAGGAACATA 895
||||||| |.||||.|.| ||.||..|.|| |.||.|||||||
RBAM_005040__ 851 GTTTCTTAGAACGCAGCGACAT--TCAGCGCATGC---TGGAAGAACATA 895
BSNT_00801___ 896 TGTGTTCCTCCGCGCAGGAAATGGTCAAAAACATTTATGACAGCCTCCTC 945
||...|.||||||||||||.|||||||||||||||||.||||||||.||.
RBAM_005040__ 896 TGGACTGCTCCGCGCAGGATATGGTCAAAAACATTTACGACAGCCTGCTG 945
BSNT_00801___ 946 AAATTGCAGGATTTTCAGCTTCACGATGATTTTACGTTAATTGTTTTGCG 995
|.|.|.|||||.|||||||||||.||.|||||||||||||||||||||..
RBAM_005040__ 946 AGACTCCAGGACTTTCAGCTTCATGACGATTTTACGTTAATTGTTTTGAA 995
BSNT_00801___ 996 GAGAAAGGTTTAA 1008
.||||||||||||
RBAM_005040__ 996 AAGAAAGGTTTAA 1008
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