Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00800 and RBAM_005030

See DNA alignment / Visit BSNT_00800 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:35
# Commandline: needle
#    -asequence pep-align/BSNT_00800___rsbT.1.9828.seq
#    -bsequence pep-align/RBAM_005030___rsbT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00800___rsbT-RBAM_005030___rsbT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00800___rsbT-RBAM_005030___rsbT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00800___rsbT
# 2: RBAM_005030___rsbT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 133
# Identity:     125/133 (94.0%)
# Similarity:   128/133 (96.2%)
# Gaps:           0/133 ( 0.0%)
# Score: 639.0
# 
#
#=======================================

BSNT_00800___      1 MNDQSCVKIMTEWDIVAARQLGRNVAKELGFGTVDQARITTAISELARNI     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_005030__      1 MNDQSCVKIMTEWDIVAARQLGRNVAKELGFGTVDQARITTAISELARNI     50

BSNT_00800___     51 YLYAGKGQIGIEQVADRGKKGLKIIAEDQGPGIPDIRKVMEDGFSTSGGL    100
                     ||||||||:.||||.|||||||||||||:|||||||||||||||||||||
RBAM_005030__     51 YLYAGKGQVSIEQVNDRGKKGLKIIAEDKGPGIPDIRKVMEDGFSTSGGL    100

BSNT_00800___    101 GAGLPGVKRLMDEFSLNSVTGEGTEIQAIKWLR    133
                     ||||||||||||||||.||..|||||||:||||
RBAM_005030__    101 GAGLPGVKRLMDEFSLQSVAEEGTEIQAVKWLR    133


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