Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00800 and RBAM_005030
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:35
# Commandline: needle
# -asequence dna-align/BSNT_00800___rsbT.1.9828.seq
# -bsequence dna-align/RBAM_005030___rsbT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00800___rsbT-RBAM_005030___rsbT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00800___rsbT-RBAM_005030___rsbT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00800___rsbT
# 2: RBAM_005030___rsbT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 402
# Identity: 338/402 (84.1%)
# Similarity: 338/402 (84.1%)
# Gaps: 0/402 ( 0.0%)
# Score: 1434.0
#
#
#=======================================
BSNT_00800___ 1 ATGAACGACCAATCCTGTGTAAAAATCATGACAGAATGGGATATTGTGGC 50
||||||||||||||||||||.|||||||||||||||||||||||.||.||
RBAM_005030__ 1 ATGAACGACCAATCCTGTGTGAAAATCATGACAGAATGGGATATCGTAGC 50
BSNT_00800___ 51 CGCCAGACAGCTGGGACGAAACGTTGCGAAAGAACTGGGTTTCGGCACGG 100
||||||||||||.||.||.|||||||||||.|||.|.||.|||||.||||
RBAM_005030__ 51 CGCCAGACAGCTTGGCCGCAACGTTGCGAAGGAATTAGGCTTCGGTACGG 100
BSNT_00800___ 101 TAGACCAGGCTAGAATTACAACGGCTATTTCAGAATTAGCCAGGAATATT 150
|.||||||||.|||||.||.||||||||.||||||||.|||||.||.|||
RBAM_005030__ 101 TGGACCAGGCCAGAATCACGACGGCTATCTCAGAATTGGCCAGAAACATT 150
BSNT_00800___ 151 TATTTATATGCCGGCAAAGGGCAGATTGGAATTGAACAGGTCGCAGACAG 200
||.||||||||.||||||||.|||.|..|.||.|||||.||....|||||
RBAM_005030__ 151 TACTTATATGCAGGCAAAGGCCAGGTCAGCATAGAACAAGTAAACGACAG 200
BSNT_00800___ 201 AGGAAAAAAAGGCCTGAAAATCATAGCGGAAGACCAAGGGCCGGGAATTC 250
|||.|||||||||||.|||||.|||||.||||||.||||.||.|||||.|
RBAM_005030__ 201 AGGGAAAAAAGGCCTTAAAATTATAGCAGAAGACAAAGGACCCGGAATCC 250
BSNT_00800___ 251 CTGATATCCGAAAAGTCATGGAAGACGGGTTTTCAACGTCTGGAGGACTT 300
|.||.|||||.|||||.|||||||||||.|||||||||||.||.|||||.
RBAM_005030__ 251 CCGACATCCGTAAAGTGATGGAAGACGGCTTTTCAACGTCAGGCGGACTG 300
BSNT_00800___ 301 GGTGCGGGACTTCCCGGGGTCAAAAGGCTGATGGATGAATTCAGCTTAAA 350
||.|||||||||||.||.|||||||||||||||||.|||||||||.|..|
RBAM_005030__ 301 GGAGCGGGACTTCCGGGCGTCAAAAGGCTGATGGACGAATTCAGCCTGCA 350
BSNT_00800___ 351 TTCCGTAACGGGGGAAGGAACAGAGATACAAGCCATCAAATGGCTTCGGT 400
.||.||..|.|.|||||||||||||||.||||||.|.|||||||||||||
RBAM_005030__ 351 ATCTGTTGCAGAGGAAGGAACAGAGATTCAAGCCGTGAAATGGCTTCGGT 400
BSNT_00800___ 401 AG 402
||
RBAM_005030__ 401 AG 402
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