Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00798 and RBAM_005010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:35
# Commandline: needle
# -asequence pep-align/BSNT_00798___rsbR.1.9828.seq
# -bsequence pep-align/RBAM_005010___rsbR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00798___rsbR-RBAM_005010___rsbR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00798___rsbR-RBAM_005010___rsbR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00798___rsbR
# 2: RBAM_005010___rsbR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 274
# Identity: 217/274 (79.2%)
# Similarity: 238/274 (86.9%)
# Gaps: 1/274 ( 0.4%)
# Score: 1082.0
#
#
#=======================================
BSNT_00798___ 1 MMSNQTVYQFIAENQNELLQLWTDTLKELSEQESYQLTDQVYENISKEYI 50
||||.|||||.:..:|||..||..|||:..||.||||:.:.|||.|:||
RBAM_005010__ 1 -MSNQKVYQFIIDQHDELLDTWTAKLKEVGNQEDYQLTNHICENICKDYI 49
BSNT_00798___ 51 DILLLSVKDENAAESQISELALRAVQIGLSMKFLATALAEFWKRLYTKMN 100
||||||.|::.|.|.|||||||||||:|||:|.|:..|:||||.||..|.
RBAM_005010__ 50 DILLLSTKNDEATEEQISELALRAVQLGLSLKLLSATLSEFWKLLYETMV 99
BSNT_00798___ 101 DKRLPDQESTELIWQIDRFFSPINTEIFNQYSISWEKTVSLQKIALQELS 150
|..:.||:..:||.:||.||:||||||.|||||||||||:||||||||||
RBAM_005010__ 100 DLNMADQDRADLILEIDSFFNPINTEILNQYSISWEKTVTLQKIALQELS 149
BSNT_00798___ 151 APLIPVFENITVMPLVGTIDTERAKRIMENLLNGVVKHRSQVVLIDITGV 200
||||||||::|||||||||||||||.||||||||||||||||||||||||
RBAM_005010__ 150 APLIPVFEHVTVMPLVGTIDTERAKHIMENLLNGVVKHRSQVVLIDITGV 199
BSNT_00798___ 201 PVVDTMVAHHIIQASEAVRLVGAKCLLAGIRPEIAQTIVNLGIDLSQVIT 250
|||||||||||||||||||||||||||.||||||||||||||||||||||
RBAM_005010__ 200 PVVDTMVAHHIIQASEAVRLVGAKCLLVGIRPEIAQTIVNLGIDLSQVIT 249
BSNT_00798___ 251 KNTLQKGIQTALEMTDRKIVSLGE 274
|||||||||||||||:||||||||
RBAM_005010__ 250 KNTLQKGIQTALEMTNRKIVSLGE 273
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