Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00797 and RBAM_005000

See DNA alignment / Visit BSNT_00797 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:35
# Commandline: needle
#    -asequence pep-align/BSNT_00797___ydcE.1.9828.seq
#    -bsequence pep-align/RBAM_005000___ydcE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00797___ydcE-RBAM_005000___ydcE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00797___ydcE-RBAM_005000___ydcE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00797___ydcE
# 2: RBAM_005000___ydcE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 116
# Identity:     116/116 (100.0%)
# Similarity:   116/116 (100.0%)
# Gaps:           0/116 ( 0.0%)
# Score: 574.0
# 
#
#=======================================

BSNT_00797___      1 MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTAIVAAITAQ     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_005000__      1 MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTAIVAAITAQ     50

BSNT_00797___     51 IQKAKLPTHVEIDAKRYGFERDSVILLEQIRTIDKQRLTDKITHLDDEMM    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_005000__     51 IQKAKLPTHVEIDAKRYGFERDSVILLEQIRTIDKQRLTDKITHLDDEMM    100

BSNT_00797___    101 DKVDEALQISLALIDF    116
                     ||||||||||||||||
RBAM_005000__    101 DKVDEALQISLALIDF    116


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