Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00797 and RBAM_005000
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:35
# Commandline: needle
# -asequence dna-align/BSNT_00797___ydcE.1.9828.seq
# -bsequence dna-align/RBAM_005000___ydcE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00797___ydcE-RBAM_005000___ydcE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00797___ydcE-RBAM_005000___ydcE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00797___ydcE
# 2: RBAM_005000___ydcE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity: 336/351 (95.7%)
# Similarity: 336/351 (95.7%)
# Gaps: 0/351 ( 0.0%)
# Score: 1620.0
#
#
#=======================================
BSNT_00797___ 1 TTGATTGTGAAACGCGGCGATGTTTATTTTGCTGATTTATCTCCTGTTGT 50
||||||||.||.||||||||||||||||||||||||||||||||||||||
RBAM_005000__ 1 TTGATTGTAAAGCGCGGCGATGTTTATTTTGCTGATTTATCTCCTGTTGT 50
BSNT_00797___ 51 TGGCTCAGAGCAAGGCGGGGTGCGCCCGGTCTTAGTGATCCAAAATGACA 100
||||||||||||||||||.||.||||||||.|||||||||||||||||.|
RBAM_005000__ 51 TGGCTCAGAGCAAGGCGGCGTACGCCCGGTTTTAGTGATCCAAAATGATA 100
BSNT_00797___ 101 TCGGAAATCGCTTCAGCCCAACTGCTATTGTTGCAGCCATAACAGCACAA 150
|||||||||||||.|||||.||||||||||||||||||||||||||.|||
RBAM_005000__ 101 TCGGAAATCGCTTTAGCCCGACTGCTATTGTTGCAGCCATAACAGCCCAA 150
BSNT_00797___ 151 ATACAGAAAGCGAAATTACCAACCCACGTCGAAATCGATGCAAAACGCTA 200
|||||||||||||||||||||||||||||||||||.||||||||||||||
RBAM_005000__ 151 ATACAGAAAGCGAAATTACCAACCCACGTCGAAATTGATGCAAAACGCTA 200
BSNT_00797___ 201 CGGTTTTGAAAGAGATTCCGTTATTTTGCTGGAGCAAATTCGGACGATTG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_005000__ 201 CGGTTTTGAAAGAGATTCCGTTATTTTGCTGGAGCAAATTCGGACGATTG 250
BSNT_00797___ 251 ACAAGCAAAGGTTAACGGATAAGATTACTCATCTGGATGATGAAATGATG 300
||||||||||.|||||||||||.||.||||||||||||||||||||||||
RBAM_005000__ 251 ACAAGCAAAGATTAACGGATAAAATAACTCATCTGGATGATGAAATGATG 300
BSNT_00797___ 301 GATAAGGTTGATGAAGCCTTACAAATCAGTTTGGCACTCATTGATTTTTA 350
||||||||||||||||||.|.|||||||||||||||||||||||||||||
RBAM_005000__ 301 GATAAGGTTGATGAAGCCCTGCAAATCAGTTTGGCACTCATTGATTTTTA 350
BSNT_00797___ 351 G 351
|
RBAM_005000__ 351 G 351
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