Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00796 and RBAM_004990

See DNA alignment / Visit BSNT_00796 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:35
# Commandline: needle
#    -asequence pep-align/BSNT_00796___ydcD.1.9828.seq
#    -bsequence pep-align/RBAM_004990___ydcD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00796___ydcD-RBAM_004990___ydcD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00796___ydcD-RBAM_004990___ydcD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00796___ydcD
# 2: RBAM_004990___ydcD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 93
# Identity:      92/93 (98.9%)
# Similarity:    93/93 (100.0%)
# Gaps:           0/93 ( 0.0%)
# Score: 454.0
# 
#
#=======================================

BSNT_00796___      1 MSESSARTEMKISLPENLVAELDGVAMREKRSRNELISQAVRAYVSERTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_004990__      1 MSESSARTEMKISLPENLVAELDGVAMREKRSRNELISQAVRAYVSERTT     50

BSNT_00796___     51 RHNRDLMRRGYMEMAKINLNISSEAHFAECEAETTVERLVSGG     93
                     ||||||||||||||||||||||||||:||||||||||||||||
RBAM_004990__     51 RHNRDLMRRGYMEMAKINLNISSEAHYAECEAETTVERLVSGG     93


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