Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00793 and RBAM_004970
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:34
# Commandline: needle
# -asequence pep-align/BSNT_00793___ydcC.1.9828.seq
# -bsequence pep-align/RBAM_004970___ydcC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00793___ydcC-RBAM_004970___ydcC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00793___ydcC-RBAM_004970___ydcC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00793___ydcC
# 2: RBAM_004970___ydcC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 373
# Identity: 297/373 (79.6%)
# Similarity: 319/373 (85.5%)
# Gaps: 38/373 (10.2%)
# Score: 1539.0
#
#
#=======================================
BSNT_00793___ 1 MRLLWYASVLPKRVPSVPLKSNKRFLPFTSIEKKGLKKVRKSFVLLLTGL 50
:|||||||||||
RBAM_004970__ 1 --------------------------------------MRKSFVLLLTGL 12
BSNT_00793___ 51 LAVLILSACGQKTQQDIVAGLDEKAKEYTSYKAKAKMTIETGSEPQVYNV 100
||||||||||||:|:|||.|||:||||||||||||||||||||:||||||
RBAM_004970__ 13 LAVLILSACGQKSQEDIVNGLDKKAKEYTSYKAKAKMTIETGSDPQVYNV 62
BSNT_00793___ 101 EIWHKKPSLYRVYLENPKKDQNQVILRNENGVFVLTPSLNKSFRFQSDWP 150
||||||||||||||||||||||||||||.|||||||||||||||||||||
RBAM_004970__ 63 EIWHKKPSLYRVYLENPKKDQNQVILRNANGVFVLTPSLNKSFRFQSDWP 112
BSNT_00793___ 151 NNSSQVYLFESLVKDVQNDSDAVFTAKEKKYVFETKTNYQHNKMLPTQEI 200
|||||||||||||||||:|.|||::||:|||.||||||||||||||||||
RBAM_004970__ 113 NNSSQVYLFESLVKDVQHDKDAVYSAKDKKYTFETKTNYQHNKMLPTQEI 162
BSNT_00793___ 201 TFNKKDMSPSSVKVMDTDRKVMVKVEFSSFEFNKQFDKESFDEKKNMTLS 250
||||||||||.||||||||||||||||.||||||.|||:|||||||||||
RBAM_004970__ 163 TFNKKDMSPSLVKVMDTDRKVMVKVEFKSFEFNKPFDKDSFDEKKNMTLS 212
BSNT_00793___ 251 QMDVATSAKPSDTFAVKTPLELPLGVKLLEEKDISTEDGKRIIMTYGGEK 300
||||||||||||:|||||||::|.|||.||||||||.|||||:|||||||
RBAM_004970__ 213 QMDVATSAKPSDSFAVKTPLQVPAGVKKLEEKDISTADGKRIVMTYGGEK 262
BSNT_00793___ 301 SFTLIQEKAQIAKASSSVTLNGEPVNLGYTIGALSDASLSWTYDGVDYLL 350
|||||||||.||||:|:|||.|||||||:|:.||||.||:||||||||||
RBAM_004970__ 263 SFTLIQEKAHIAKAASAVTLKGEPVNLGFTVAALSDTSLTWTYDGVDYLL 312
BSNT_00793___ 351 SSKDLSKEEMVTVAKSMQGQSSK 373
||:||:|:|||..||||||||||
RBAM_004970__ 313 SSQDLTKDEMVAAAKSMQGQSSK 335
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