Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00792 and RBAM_004960

See DNA alignment / Visit BSNT_00792 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:34
# Commandline: needle
#    -asequence pep-align/BSNT_00792___acpS.1.9828.seq
#    -bsequence pep-align/RBAM_004960___acpS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00792___acpS-RBAM_004960___acpS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00792___acpS-RBAM_004960___acpS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00792___acpS
# 2: RBAM_004960___acpS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 121
# Identity:      84/121 (69.4%)
# Similarity:    97/121 (80.2%)
# Gaps:           0/121 ( 0.0%)
# Score: 414.0
# 
#
#=======================================

BSNT_00792___      1 MIYGIGLDITELKRIASMAGRQKRFAERILTRSELDQYYELSEKRKIEFL     50
                     ||:|||:||.||.||.:|..||.||.:||||.:|..::..||:|||||||
RBAM_004960__      1 MIFGIGIDIVELHRIENMLSRQARFPQRILTEAEYARFTLLSDKRKIEFL     50

BSNT_00792___     51 AGRFAAKEAFSKAFGTGIGRQLSFQDIEIRKDQNSKPYIICTKLSQAAVH    100
                     |||||||||||||:|||||::|||||||...|:..||.:.|.||..|.||
RBAM_004960__     51 AGRFAAKEAFSKAYGTGIGKELSFQDIETGNDKAGKPVLACAKLDCATVH    100

BSNT_00792___    101 VSITHTKEYAAAQVVIERLSS    121
                     ||||||||||||||||||||.
RBAM_004960__    101 VSITHTKEYAAAQVVIERLSR    121


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