Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00789 and RBAM_004940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:34
# Commandline: needle
# -asequence pep-align/BSNT_00789___ydbT.1.9828.seq
# -bsequence pep-align/RBAM_004940___ydbT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00789___ydbT-RBAM_004940___ydbT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00789___ydbT-RBAM_004940___ydbT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00789___ydbT
# 2: RBAM_004940___ydbT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 495
# Identity: 343/495 (69.3%)
# Similarity: 418/495 (84.4%)
# Gaps: 10/495 ( 2.0%)
# Score: 1773.0
#
#
#=======================================
BSNT_00789___ 1 -MSEPKRLHPAAVILNLCHTIIQTIKNIILPFFFVYIVNSNHTVRFYGAI 49
||||||||||||||||.|.||:||||||||||.||||||||.:||||.|
RBAM_004940__ 1 MMSEPKRLHPAAVILNLFHIIIETIKNIILPFFLVYIVNSNHFIRFYGGI 50
BSNT_00789___ 50 ALGVLFIWLVAASIIKWRRFTYRIEDDEFRIEEGLFVTKKRYISIDRIQT 99
||.||.|||:.||:|:||:|||||||.|||||||||.||||||||||||:
RBAM_004940__ 51 ALAVLLIWLITASVIEWRKFTYRIEDGEFRIEEGLFFTKKRYISIDRIQS 100
BSNT_00789___ 100 MNTSAGLVQQIFKLVKLQIETAGGGKEAEAVLSAISVEEAERIKEAVFKK 149
||||||::||:||||||||||||.||.||||||||::||||||:..||::
RBAM_004940__ 101 MNTSAGIIQQLFKLVKLQIETAGDGKNAEAVLSAITLEEAERIRATVFQQ 150
BSNT_00789___ 150 KAQRRENELDEERLE--PEEELVPAVEVQEHYRMNAKELLLAASTSGGIG 197
||:: |||.| .|:|.:...:||..||::..|||:|||||||||
RBAM_004940__ 151 KAEQ------EERGETAAEQEPMCGEDVQSVYRLSVGELLMAASTSGGIG 194
BSNT_00789___ 198 VIISAVFALISQLDEVLPMDWLFDKFSFLQHASIGIYAVLVFIGLFIAWI 247
|||||||||.||:|||||||||:|:||||:|||||||||::||||||||:
RBAM_004940__ 195 VIISAVFALFSQIDEVLPMDWLYDRFSFLKHASIGIYAVIIFIGLFIAWL 244
BSNT_00789___ 248 FSIAGMMFRYANFQIIKKEQELVISRGIIEKHQVTIPLRKIQAIKIKENI 297
.||||||.::|||:|.|||.||||:||||||||||||||||||||:|||:
RBAM_004940__ 245 LSIAGMMIKHANFKIEKKEHELVITRGIIEKHQVTIPLRKIQAIKMKENV 294
BSNT_00789___ 298 IRQLFGFVTVSIVSAGGGDREKEEGALTILFPMIHKKKLPYMLRTFTPEY 347
||||||:.||:|||||....|| |||.|||||:|.|.||..||..|||:|
RBAM_004940__ 295 IRQLFGYATVAIVSAGSAGNEK-EGAQTILFPIIRKSKLGVMLNGFTPDY 343
BSNT_00789___ 348 TLEENCRRLPRRALKRYLFRSVIFSLFLIIPLCIFFQPWGYLSVILLPIE 397
.||||...||:|||:||||||:|||:|:||||||.|:||||.|:::||:|
RBAM_004940__ 344 VLEENRNHLPKRALRRYLFRSIIFSVFVIIPLCILFKPWGYASLLVLPVE 393
BSNT_00789___ 398 LLFGYLAYKEAAWTINGDRLQLTSRFIGRTTAIVLKKRMQVCKFSQSYFQ 447
|:.||.:::.|:|.|||.|||:|:|.:|:||.|:|::|||:.:.|:|:.|
RBAM_004940__ 394 LVLGYASFRTASWCINGGRLQITTRLVGKTTTIMLRRRMQMFEVSRSFLQ 443
BSNT_00789___ 448 KKGRLYTISTSVKSSSHMEELTVRDVGEEDAAFILNWYSYEKADG 492
|:.||.:::|:|||:.|||.:.::||.||||..|..|||||||||
RBAM_004940__ 444 KRRRLASVATAVKSAHHMEHVMLKDVSEEDAERIGRWYSYEKADG 488
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