Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00788 and RBAM_004930

See DNA alignment / Visit BSNT_00788 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:34
# Commandline: needle
#    -asequence pep-align/BSNT_00788___ydbS.1.9828.seq
#    -bsequence pep-align/RBAM_004930___ydbS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00788___ydbS-RBAM_004930___ydbS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00788___ydbS-RBAM_004930___ydbS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00788___ydbS
# 2: RBAM_004930___ydbS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 160
# Identity:     127/160 (79.4%)
# Similarity:   149/160 (93.1%)
# Gaps:           1/160 ( 0.6%)
# Score: 700.0
# 
#
#=======================================

BSNT_00788___      1 -MREQPKNQISPDGLKVWRLQEIIISAVCLLIVIAVAVLSYYFHWPYWIS     49
                      :|.||||:|||.|||||||||||:||.|||.|||.||||::|||||||:
RBAM_004930__      1 MLRAQPKNRISPSGLKVWRLQEIILSAFCLLAVIAAAVLSHFFHWPYWIT     50

BSNT_00788___     50 GVLGAVWLLGSIVTVFIIPKVRHKVWRYEVHEHEIDIQSGIFVVTRVIVP     99
                     ||||.:|:.||:::|:.|||:||::|||||||:|||||||||:|.|||||
RBAM_004930__     51 GVLGIIWIFGSVISVYAIPKIRHRIWRYEVHENEIDIQSGIFIVKRVIVP    100

BSNT_00788___    100 MVRVQHVDTSQGPLLKKYNLATVKISTAATVHSIPALEMEEADRLRDSIS    149
                     |||||||||||||||::|.||:|||||||||||||||:||||||||||||
RBAM_004930__    101 MVRVQHVDTSQGPLLRRYRLASVKISTAATVHSIPALDMEEADRLRDSIS    150

BSNT_00788___    150 RLARVTDDDV    159
                     ||||||:|||
RBAM_004930__    151 RLARVTEDDV    160


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