Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00784 and RBAM_004910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:33
# Commandline: needle
# -asequence pep-align/BSNT_00784___murF.1.9828.seq
# -bsequence pep-align/RBAM_004910___murF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00784___murF-RBAM_004910___murF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00784___murF-RBAM_004910___murF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00784___murF
# 2: RBAM_004910___murF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 482
# Identity: 354/482 (73.4%)
# Similarity: 406/482 (84.2%)
# Gaps: 27/482 ( 5.6%)
# Score: 1848.0
#
#
#=======================================
BSNT_00784___ 1 MKKDTAGKRAVFFPVYTKEREGPYLIKRTVKNIAEMVKGTLTNPQYEQTV 50
:||||||.||:|||||||||::|||:
RBAM_004910__ 1 ------------------------MIKRTVKRIADMVKGTLTNPEFEQTM 26
BSNT_00784___ 51 IHGVATDTRKLEQHQLFIPLKGERFDGHTFVEQAFEAGVAAVLWDRSVPN 100
|.|.|||||.||::|||||||||.|:|||||.||||.||:|||||||.||
RBAM_004910__ 27 IEGAATDTRTLEKNQLFIPLKGEHFNGHTFVPQAFEKGVSAVLWDRSEPN 76
BSNT_00784___ 101 PPENHAVILVDDTLTALQQLAKAYLQELGTRVIGVTGSNGKTTTKDMIHA 150
|||..|||||||||.|||.||||||:|||||||||||||||||||||:||
RBAM_004910__ 77 PPEGRAVILVDDTLEALQTLAKAYLKELGTRVIGVTGSNGKTTTKDMLHA 126
BSNT_00784___ 151 VLGTQYRVHKTGGNFNNHIGLPLTVLAMPENTEIAVLEMGMSAKGEIDLL 200
|||||||||||.||||||||||||||||||:||||||||||||:||||.|
RBAM_004910__ 127 VLGTQYRVHKTAGNFNNHIGLPLTVLAMPEDTEIAVLEMGMSARGEIDFL 176
BSNT_00784___ 201 SRLANPDAAVITNIGESHMQDLGSREGIAEAKLEIINGLKEDGVLIYIGD 250
||||.|:||||||||||||||||||||||||||||||||:|||||.|.||
RBAM_004910__ 177 SRLAEPEAAVITNIGESHMQDLGSREGIAEAKLEIINGLREDGVLFYFGD 226
BSNT_00784___ 251 EPLL-QNAYSCQTKTYGTGAHNDYQLQDVSQSEEGTHFTIKGIENTFFIP 299
|||| |..|:|:|.|||.||.||.:|:::.|:||||:|.|.||:.:||||
RBAM_004910__ 227 EPLLRQKTYTCRTTTYGAGADNDLRLKEIKQAEEGTYFNIDGIDRSFFIP 276
BSNT_00784___ 300 ILGKHNVMNAMAAIAAGAYFGITPEGAAKGLSGLKVTGMRLELIKTDSGL 349
:||:|||||||||.|||.|||||||.||.|||.||||||||||:||::|:
RBAM_004910__ 277 VLGRHNVMNAMAAYAAGIYFGITPENAALGLSRLKVTGMRLELVKTENGI 326
BSNT_00784___ 350 SIINDAYNASPTSMKAAIQLTESLEGYGKKMLVLGDMLELGDLEETFHKE 399
||:||||||||||||||::|.|:::||.||||||||||||||.|:.||:|
RBAM_004910__ 327 SIVNDAYNASPTSMKAAVELIETMKGYRKKMLVLGDMLELGDEEKAFHEE 376
BSNT_00784___ 400 CGAVISPDKIDRVFTYGKLGAFIAEGALKQFEKDRVSHYTEKKDLLQAVK 449
|||.::|.:||.|||||.||||||:||.:.||:.|||||.:||:||.|::
RBAM_004910__ 377 CGAAVNPAEIDHVFTYGTLGAFIADGARRHFEEGRVSHYLDKKELLHAIQ 426
BSNT_00784___ 450 ENASKGDLILFKASRGMKLEEIVKDLIESPLS 481
|.|:.|||:|||||||||||||||||:|..
RBAM_004910__ 427 EMAASGDLLLFKASRGMKLEEIVKDLLEKN-- 456
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