Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00784 and RBAM_004910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:34
# Commandline: needle
# -asequence dna-align/BSNT_00784___murF.1.9828.seq
# -bsequence dna-align/RBAM_004910___murF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00784___murF-RBAM_004910___murF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00784___murF-RBAM_004910___murF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00784___murF
# 2: RBAM_004910___murF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1480
# Identity: 1023/1480 (69.1%)
# Similarity: 1023/1480 (69.1%)
# Gaps: 143/1480 ( 9.7%)
# Score: 3607.0
#
#
#=======================================
BSNT_00784___ 1 ATGAAGAAGGACACTGCCGGTAAAAGGGCAGTGTTTTTTCCCGTATATAC 50
RBAM_004910__ 0 -------------------------------------------------- 0
BSNT_00784___ 51 AAAAGAAAGAGAGGGACCTTACTTGATTAAGCGAACAGTAAAAAACATTG 100
|||||.||||||||.||||||...||.|
RBAM_004910__ 1 ----------------------TTGATAAAGCGAACTGTAAAACGAATCG 28
BSNT_00784___ 101 CCGAAATGGTTAAAGGCACACTAACAAATCCGCAATATGAACAAACAGTC 150
|.||.|||||.|||||||||||.||||||||..|||.||||||||||.|.
RBAM_004910__ 29 CAGACATGGTCAAAGGCACACTGACAAATCCCGAATTTGAACAAACAATG 78
BSNT_00784___ 151 ATTCATGGAGTGGCAACCGATACAAGAAAACTGGAACAACATCAGCTCTT 200
|||.|.||.|..|||||||||||..|.|...|||||.||.|||||||.||
RBAM_004910__ 79 ATTGAGGGCGCCGCAACCGATACGCGGACTTTGGAAAAAAATCAGCTGTT 128
BSNT_00784___ 201 CATTCCGTTGAAAGGGGAACGTTTTGACGGCCACACTTTTGTGGAGCAGG 250
||||||.||.|||||.||.|.||||.||||||||||.||||||..|||.|
RBAM_004910__ 129 CATTCCTTTAAAAGGCGAGCATTTTAACGGCCACACCTTTGTGCCGCAAG 178
BSNT_00784___ 251 CTTTTGAAGCTGGTGTAGCGGCTGTTCTTTGGGATCGGTCAGTACCAAAT 300
|.||.|||...||.||..|.||.||..|.|||||.||.||.|.|||.|||
RBAM_004910__ 179 CATTCGAAAAAGGCGTTTCCGCGGTGTTGTGGGACCGCTCTGAACCGAAT 228
BSNT_00784___ 301 CCGCCCGAGAATCACGCCGTCATTTTAGTGGATGATACCCT-----TACT 345
|||||.||....|..||.|||||..|.||.|||||.||.|| ..||
RBAM_004910__ 229 CCGCCGGAAGGGCGTGCTGTCATCCTGGTCGATGACACGCTGGAGGCGCT 278
BSNT_00784___ 346 GCACTTCAGCAGCTT-GCAAAAGCCTATTTGCAGGAGCTTGGCACGCGTG 394
||| |.|| || ||||||||.||||||.|.|||||.|||||..|.|
RBAM_004910__ 279 GCA----AACA--TTGGCAAAAGCTTATTTGAAAGAGCTCGGCACAAGGG 322
BSNT_00784___ 395 TCATCGGAGTAACCGGAAGCAATGGCAAAACGACAACAAAAGATATGATT 444
|.|||||.||.|||||.|||||.||.|||||||||||.|||||.|||.||
RBAM_004910__ 323 TTATCGGGGTGACCGGGAGCAACGGAAAAACGACAACGAAAGACATGCTT 372
BSNT_00784___ 445 CACGCCGTACTGGGGACCCAGTACCGCGTCCACAAAACTGGAGGAAACTT 494
||||||||.||.||.||.|||||||||||.||||||||.|..||.||.||
RBAM_004910__ 373 CACGCCGTTCTCGGCACGCAGTACCGCGTTCACAAAACCGCCGGCAATTT 422
BSNT_00784___ 495 CAATAATCATATCGGTTTGCCGCTGACAGTTTTAGCGATGCCTGAAAATA 544
|||.|||||||||||..||||||||||.||..|.||.|||||||||.|||
RBAM_004910__ 423 CAACAATCATATCGGCCTGCCGCTGACTGTGCTTGCCATGCCTGAAGATA 472
BSNT_00784___ 545 CGGAGATCGCCGTATTGGAGATGGGAATGAGCGCCAAAGGAGAAATTGAC 594
|.||.||||||||.||.||.|||||||||||.||.|.|||.||||||||.
RBAM_004910__ 473 CAGAAATCGCCGTTTTAGAAATGGGAATGAGTGCGAGAGGCGAAATTGAT 522
BSNT_00784___ 595 CTCTTGAGCCGCCTGGCAAACCCGGATGCGGCAGTGATTACGAATATCGG 644
.|..|||||||.||.||..|.|||||.|||||.||.|||||.||||||||
RBAM_004910__ 523 TTTCTGAGCCGTCTTGCTGAACCGGAAGCGGCCGTCATTACCAATATCGG 572
BSNT_00784___ 645 CGAATCGCATATGCAAGACCTTGGCTCTAGAGAGGGCATCGCGGAGGCGA 694
.|||||.||.|||||.||..|.|||||.|||||.||.||.||||||||||
RBAM_004910__ 573 TGAATCCCACATGCAGGATTTAGGCTCAAGAGAAGGAATTGCGGAGGCGA 622
BSNT_00784___ 695 AGCTTGAAATCATTAACGGGCTTAAAGAAGACGGAGTGTTGATTTATATC 744
|.||||||||.||.|||||.|||...||||||||.||..||.|||||.||
RBAM_004910__ 623 AACTTGAAATTATAAACGGACTTCGGGAAGACGGCGTTCTGTTTTATTTC 672
BSNT_00784___ 745 GGGGACGAACCGCTTCT---TCAAAATGCATACAGCTGCCAGACGAAAAC 791
|||||.||.|||||.|| .|||||..|.||||..||||.|||.|..||
RBAM_004910__ 673 GGGGATGAGCCGCTGCTCCGCCAAAAGACGTACACTTGCCGGACAACGAC 722
BSNT_00784___ 792 GTACGGGACGGGAGCGCATAATGATTATCAGCTT--CAGGATGTCAGCCA 839
.|||||..|.||.|||.|.||||| |.||.||.| .||.|....|.|.|
RBAM_004910__ 723 ATACGGCGCAGGCGCGGACAATGA-TCTCCGCCTGAAAGAAATAAAACAA 771
BSNT_00784___ 840 GAGTGAGGAAGGAACCCATTTTACAATCAAAGGGATAGAAAACACG---- 885
|.| ||.|||||.||..|.||.|..|||.|.|||||.|| .||
RBAM_004910__ 772 GCG-GAAGAAGGCACGTACTTCAATATCGACGGGATCGA----CCGTTCT 816
BSNT_00784___ 886 TTTTTTATTCCGATACTCGGCAAGCACAATGTGATGAACGCCATGGCAGC 935
||.|||||||||.|.|||||||..||.|||||||||||.||||||||.||
RBAM_004910__ 817 TTCTTTATTCCGGTTCTCGGCAGACATAATGTGATGAATGCCATGGCTGC 866
BSNT_00784___ 936 GAT-TGCTGCAGGGGCTTATTTTGGCATCACGCCTGAGGGTGCGGCAAAA 984
|| .||.||.||....|||||.|||||.|||||.||...|||.||....
RBAM_004910__ 867 -ATACGCCGCCGGCATCTATTTCGGCATTACGCCGGAAAATGCCGCTCTG 915
BSNT_00784___ 985 GGACTGAGCGGCCTAAAGGTAACCGGGATGAGACTTGAACTCATCAAAAC 1034
|||||||||.||||.|||||.||.|||||||||.|.|||||..|||||||
RBAM_004910__ 916 GGACTGAGCCGCCTGAAGGTGACGGGGATGAGATTGGAACTGGTCAAAAC 965
BSNT_00784___ 1035 AGACAGCGGCCTTTCGATAATCAATGACGCTTATAATGCGAGCCCGACTT 1084
.||.|.||||.|.|||||..|.||.|||||.|||||||||||||||||.|
RBAM_004910__ 966 GGAAAACGGCATCTCGATCGTAAACGACGCGTATAATGCGAGCCCGACGT 1015
BSNT_00784___ 1085 CCATGAAAGCTGCAATTCAATTGACAGAAAGCCTCG----AAGGCTA-CG 1129
|.||||||||.||..|..||||.|..|||| || ||||||| ||
RBAM_004910__ 1016 CAATGAAAGCGGCGGTCGAATTAATCGAAA----CGATGAAAGGCTATCG 1061
BSNT_00784___ 1130 GCAAAAAAATGCTCGTGCTCGGTGATATGCTTGAACTCGGCGATCTTGAA 1179
| ||.||||||||||||||||||||||||||||||||.||.|| ||||
RBAM_004910__ 1062 G-AAGAAAATGCTCGTGCTCGGTGATATGCTTGAACTTGGTGA---TGAA 1107
BSNT_00784___ 1180 GAAA---CGTTCCATAAAGAGTGCGGCGCTGTGATCAGCCCTGATAAAAT 1226
|||| |.|||||..||||.|||||.||||.|.|||..||.|...||||
RBAM_004910__ 1108 GAAAAAGCATTCCACGAAGAATGCGGAGCTGCGGTCAATCCGGCGGAAAT 1157
BSNT_00784___ 1227 TGACCGCGTCTTTACGTACGGAAAACTGGGAGCTTTTATCGCGGAAGGCG 1276
.||||..||.|||||.|||||.|.|||.||.||.||.|||||.||.||.|
RBAM_004910__ 1158 CGACCATGTGTTTACTTACGGCACACTCGGCGCATTCATCGCTGACGGAG 1207
BSNT_00784___ 1277 C---CCTGAAACAATTTGAGAAAGACCGCGTCAGCCATTACACTGAGAAA 1323
| ||.| ||.|||||..|||..||||||||||||||...|||.|||
RBAM_004910__ 1208 CGCGCCGG---CATTTTGAAGAAGGGCGCGTCAGCCATTATCTTGACAAA 1254
BSNT_00784___ 1324 AAAGATCTCCTCCAAGCTGTGAAGGAAA---ACGCATCAAAAGGCGATTT 1370
|||||.||.||.||.||..|..|||||| .|||.|| .||||||.|
RBAM_004910__ 1255 AAAGAACTGCTTCACGCCATACAGGAAATGGCCGCTTC---CGGCGATCT 1301
BSNT_00784___ 1371 GATTTTATTCAAAGCGTCCAGAGGTATGAAGCTTGAAGAAATCGTTAAAG 1420
..||.|.||.|||||.||.||||||||||||||.||||||||||||||||
RBAM_004910__ 1302 CCTTCTGTTTAAAGCATCGAGAGGTATGAAGCTCGAAGAAATCGTTAAAG 1351
BSNT_00784___ 1421 ATTTAATAGAGAGCCCGCTTTCATAA---- 1446
|||||.|||||| |.||
RBAM_004910__ 1352 ATTTATTAGAGA----------AGAACTGA 1371
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