Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00781 and RBAM_004890

See DNA alignment / Visit BSNT_00781 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:33
# Commandline: needle
#    -asequence pep-align/BSNT_00781___ydbP.1.9828.seq
#    -bsequence pep-align/RBAM_004890___ydbP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00781___ydbP-RBAM_004890___ydbP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00781___ydbP-RBAM_004890___ydbP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00781___ydbP
# 2: RBAM_004890___ydbP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 106
# Identity:      97/106 (91.5%)
# Similarity:   103/106 (97.2%)
# Gaps:           1/106 ( 0.9%)
# Score: 530.0
# 
#
#=======================================

BSNT_00781___      1 MKKITTNEQFNELIQSDKEIIVKFYADWCPDCTRMNMFIGDILEEYNQND     50
                     ||||:|.|||||||||||||||||:|||||||||||||||||||||||||
RBAM_004890__      1 MKKISTTEQFNELIQSDKEIIVKFFADWCPDCTRMNMFIGDILEEYNQND     50

BSNT_00781___     51 WYELNKDELPDLAEKYQVMGIPSLLIFKNGEKTAHLHSANAKTPEEVTEF    100
                     |||||:||||:||:||||||||||||||||||.|||||||||||||||||
RBAM_004890__     51 WYELNRDELPELADKYQVMGIPSLLIFKNGEKKAHLHSANAKTPEEVTEF    100

BSNT_00781___    101 LSEHIS    106
                     ||:|| 
RBAM_004890__    101 LSQHI-    105


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