Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00778 and RBAM_004860

See DNA alignment / Visit BSNT_00778 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:33
# Commandline: needle
#    -asequence pep-align/BSNT_00778.1.9828.seq
#    -bsequence pep-align/RBAM_004860___ydbN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00778-RBAM_004860___ydbN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00778-RBAM_004860___ydbN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00778
# 2: RBAM_004860___ydbN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 48
# Identity:      35/48 (72.9%)
# Similarity:    41/48 (85.4%)
# Gaps:           0/48 ( 0.0%)
# Score: 181.0
# 
#
#=======================================

BSNT_00778         1 MPKRKVKTYQQLIQENKEAIMGNPKLMNVIYDRIDRKHQKNLQEQNNT     48
                     |.|||:|||:|||:|||.|||.|.||||||||||||||||.|:..::|
RBAM_004860__      1 MAKRKIKTYEQLIKENKAAIMNNQKLMNVIYDRIDRKHQKLLRHNSHT     48


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