Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00778 and RBAM_004860

See Amino acid alignment / Visit BSNT_00778 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:33
# Commandline: needle
#    -asequence dna-align/BSNT_00778.1.9828.seq
#    -bsequence dna-align/RBAM_004860___ydbN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00778-RBAM_004860___ydbN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00778-RBAM_004860___ydbN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00778
# 2: RBAM_004860___ydbN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 150
# Identity:     117/150 (78.0%)
# Similarity:   117/150 (78.0%)
# Gaps:           6/150 ( 4.0%)
# Score: 455.0
# 
#
#=======================================

BSNT_00778         1 ATGCCGAAGCGTAAAGTGAAAACTTACCAACAGCTGATTCAGGAAAACAA     50
                     |||.||||.||||||.|.|||||.|||.||||||||||..|.||||||||
RBAM_004860__      1 ATGGCGAAACGTAAAATAAAAACATACGAACAGCTGATAAAAGAAAACAA     50

BSNT_00778        51 AGAGGCGATTATGGGCAATCCAAAGCTGATGAACGTTATTTATGACAGGA    100
                     .|.|||.||||||...||||.||||||||||||.||.||.||||||||.|
RBAM_004860__     51 GGCGGCCATTATGAATAATCAAAAGCTGATGAATGTGATCTATGACAGAA    100

BSNT_00778       101 TCGACCGCAAGCATCAAAAAAATCTGCAAGAGCAAAACA---ATACATAA    147
                     |.|||||.||||||||||||   ||||....|||.||||   ||||||||
RBAM_004860__    101 TTGACCGTAAGCATCAAAAA---CTGCTCCGGCACAACAGCCATACATAA    147


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